Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0481 ATGGCAGATTCAAGGGTTGACACTGTTGCCAGATTAGCTCAATGGAAAATCGACAACTTTGGACCTTGTTCCTACAAAAAATCTGACCCTTTTAAGGTTGGAATCTGGAACTGGTACTTATCCATAGAGAGGAATAGGTACCTATACATACATCTTTTTCCAGAACCTTCTCGTATTTCTAAGGAGAACCCACCTGTTGCCAAGTTCATTCTTCGAGTTTCTAATGCCTCTTCTTCTCGGAAGTTGTATATTTCTTCTGTTCATGAAAGAGTGCTTCGGACATATGATGACTTTGTCTGGCCTGTTGATACTACATTTGTGGGCCGCTTCACTATTGATGTTGAATTTCTTGACCTGAAGATATACCCTCTGAATGGTGGAGAAGCTAGTTCTGTATGGTCGTACGATAGAAAAATGCAAACCATTGCAGAACAAAGTACTCTTAGTTGCCTCTCCCGCATGCTTGATGAGGCTATATATGCTGACCTAACCATTATCACTTCAGATGGTACATTGAGAGCTCACAAGGCAATTTTGTCTGCAAGTTCTCCTGTGTTCCAGAGCATGTTTCATCACGACCTGAAGGAAAAAGAATCATCTACAATCCGTATAGAAGACATGTCACCTGAATCATGCACGGTTCTCCTAAGTTACTTGTATGGAACAATAAAACAAGAAGATTTCTGGAAACACCGGCTCGCATTGCTTGGAGCGGCCAACAAATATGACATTGGCGGTCTCAAGGATTTATGTGAGGAAAGCTTACTGGAAGATCTTAACTCGGGAAATGTTCTCGAGAGGCTAAACGAGGCTTGGCTTTATCAGCTACACAAGTTGAAGAAAGGGTGTTTGACCTTTTTATTTGAATTTGGTAAGATATATGATGTTAGAGATGAAATGAATAACTTTTTTCAGCATGCAGATAGGGAACTATTGCTGGAGATGTTTCAGGAAGTGCTTGCCATTTGGAAACCTGTATAG 981 0.4077 MADSRVDTVARLAQWKIDNFGPCSYKKSDPFKVGIWNWYLSIERNRYLYIHLFPEPSRISKENPPVAKFILRVSNASSSRKLYISSVHERVLRTYDDFVWPVDTTFVGRFTIDVEFLDLKIYPLNGGEASSVWSYDRKMQTIAEQSTLSCLSRMLDEAIYADLTIITSDGTLRAHKAILSASSPVFQSMFHHDLKEKESSTIRIEDMSPESCTVLLSYLYGTIKQEDFWKHRLALLGAANKYDIGGLKDLCEESLLEDLNSGNVLERLNEAWLYQLHKLKKGCLTFLFEFGKIYDVRDEMNNFFQHADRELLLEMFQEVLAIWKPV 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0481 326 Pfam BTB/POZ domain 153 257 IPR000210 GO:0005515
Lal17g0481 326 PANTHER OS08G0495500 PROTEIN-RELATED 3 326 IPR044714 -
Lal17g0481 326 CDD MATH 15 101 IPR002083 GO:0005515
Lal17g0481 326 CDD BTB_POZ_ZBTB_KLHL-like 160 242 - -
Lal17g0481 326 SUPERFAMILY POZ domain 145 257 IPR011333 -
Lal17g0481 326 SMART BTB_4 161 259 IPR000210 GO:0005515
Lal17g0481 326 PANTHER BTB/POZ DOMAIN PLANT PROTEIN 3 326 - -
Lal17g0481 326 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Lal17g0481 326 Gene3D Potassium Channel Kv1.1; Chain A 133 288 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0481 Lal-Chr17 3313425 3316389 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lal17g0481 BTB 3.3e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0481 K10523 - rcu:8278000 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0481 17 3313425 3316389 Lal4g0425 4 2958651 2962417 LSH