Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0475 ATGGCCGCTTTCGGTGGCGCCGCCGTTGTCTCTTCTCGCATCCTCCCTTCCGCTACCAGAGCTTCACTCTCACTCTCTTCTTCCCGCTCCTTCTTCTCTTTCGAATGCTTGCGTTCCTCTCCTCGCATTTCTAACCTCTTTCTCAATCAGCGAAGAGTTTCAGAGGTTCGTGTTTCGAGTAGAAGATACGGCACCGTTTCTGCGGTTGCGTCTGATCCTGATCAGTTGAAGAATGCGAGAGAAGATATCAAGGAGCTTCTTAAAACCAAGTTCTGCCATCCAATTCTGATTCGCTTGGGATGGCATGATGCTGGTACTTATAATAAGAATATCGAGGAGTGGCCACAGAGAGGTGGAGCCAATGGTAGCTTAAGATTTGAAGTTGAGCAGAAACATGCAGCCAATGCTGGACTTGTAAGTGCATTGAAACTTCTTCAGCCAATCAAAGACAAATACTCTGGTGTGACATATGCAGATTTATTTCAGTTGGCCAGTGCTACTGCTGTGGAGGAAGCTGGAGGCCCAAAAATCCCTATGAAATATGGAAGAGTGGATGTAACTAGTCCTGAACAATGCCCTGAAGAAGGAAGGCTTCCTGATGCTGGTCCCCCCTCACCTGCTGATCATTTGCGTCAAGTTTTCTACCGGATGGGTTTGAATGACAAGGAAATTGTTGCATTATCTGGTGCACACACATTGGGGAGGTCTAGACCAGATCGCAGCGGCTGGGGCAAGCCTGAGACTAAATATACGAAAGATGGGCCGGGAGCACCTGGCGGACAATCCTGGACAGCACAGTGGTTGAAATTTGATAACTCTTACTTCAAGGACATCAAAGAAAAAAGGGATGAAGATCTATTGGTACTGCCAACTGACGCTGCTCTTTTTGAAGATCCGTCCTTCAAGGTATACTCTGAAAAATATGCTCAAGATCAGGAAGCATTCTTTAAAGATTATGCCGAAGCCCATGCCAAACTTAGCAACCTTGGAGCTAAATTTGATCCTCCAGAGGGTATTGTGATAGATGGTTCTCCGAATGTACAAGGAGAGAAGTTTGTAGCGGCCAAGTACTCCTCTGGAAAGAGAGAGTTGTCAGAGGCTATGAAGCAGAAGATTCGGGCTGAATATCAGGCAGTTGGCGGAAGCCCAGATAAGCCTCTGCAGTCAAACTATTTTCTAAACATCATAATTGTAATTGCTGTTTTGGCAGTTTTGACTTCACTTTTTGGAAATTAG 1236 0.4587 MAAFGGAAVVSSRILPSATRASLSLSSSRSFFSFECLRSSPRISNLFLNQRRVSEVRVSSRRYGTVSAVASDPDQLKNAREDIKELLKTKFCHPILIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEVEQKHAANAGLVSALKLLQPIKDKYSGVTYADLFQLASATAVEEAGGPKIPMKYGRVDVTSPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSYFKDIKEKRDEDLLVLPTDAALFEDPSFKVYSEKYAQDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVIDGSPNVQGEKFVAAKYSSGKRELSEAMKQKIRAEYQAVGGSPDKPLQSNYFLNIIIVIAVLAVLTSLFGN 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0475 411 PANTHER L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED 363 411 - -
Lal17g0475 411 PANTHER L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED 9 348 - -
Lal17g0475 411 CDD ascorbate_peroxidase 66 334 - -
Lal17g0475 411 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 363 411 IPR044831 GO:0004601|GO:0034599
Lal17g0475 411 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 9 348 IPR044831 GO:0004601|GO:0034599
Lal17g0475 411 ProSiteProfiles Plant heme peroxidase family profile. 96 350 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal17g0475 411 PRINTS Haem peroxidase superfamily signature 93 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal17g0475 411 PRINTS Haem peroxidase superfamily signature 155 172 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal17g0475 411 PRINTS Haem peroxidase superfamily signature 173 185 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal17g0475 411 PRINTS Haem peroxidase superfamily signature 223 238 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal17g0475 411 PRINTS Haem peroxidase superfamily signature 263 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal17g0475 411 PRINTS Plant ascorbate peroxidase signature 72 92 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lal17g0475 411 PRINTS Plant ascorbate peroxidase signature 93 108 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lal17g0475 411 PRINTS Plant ascorbate peroxidase signature 154 172 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lal17g0475 411 PRINTS Plant ascorbate peroxidase signature 173 185 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lal17g0475 411 PRINTS Plant ascorbate peroxidase signature 292 316 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lal17g0475 411 SUPERFAMILY Heme-dependent peroxidases 71 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal17g0475 411 MobiDBLite consensus disorder prediction 188 207 - -
Lal17g0475 411 Gene3D - 79 332 - -
Lal17g0475 411 Pfam Peroxidase 80 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal17g0475 411 MobiDBLite consensus disorder prediction 230 262 - -
Lal17g0475 411 Gene3D Peroxidase, domain 2 201 324 - -
Lal17g0475 411 ProSitePatterns Peroxidases proximal heme-ligand signature. 223 233 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0475 Lal-Chr17 3262549 3267673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0475 80 329 Peroxidase AT2G22420 27.698 3.66e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0475 K00434 - zju:107421087 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0475 17 3262549 3267673 Lal17g0475 17 3262549 3267673 ECH