Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0473 ATGGCATCAGAGCTTCAATTACCACCTGGGTTCAGATTCCATCCAACAGATGAGGAACTTGTGATGCACTATCTATGCCGCAAATGTGCATCACAACCCATCGTTGTTCCAATCATAGTTGAAATTGATCTCTATAAATATGATCCTTGGGAACTTCCAGGTCTGGCTTCCTATGGAGAAAAGGAGTGGTATTTCTTCTCACCAAGGGACAGGAAATACCCAAACGGTTCACGACCGAACCGGGCCGCTGGATCGGGTTACTGGAAAGCGACCGGTGCGGATAAACCGATTTGTCATCCGAAACCGGTTGGGATTAAAAAAGCGTTGGTGTTTTATGCTGGTAAAGCTCCCAAAGGTGACAAGACTAATTGGATTATGCATGAGTATCGTCTTGCTGATGTAGATCGTTCTGCTCGCAAAAAGAATAGCTTAAGGCTGGATGATTGGGTTCTTTGCCGAATTTACAACAAAAAGGGCGCAATTGAAAAACAACCAAACACCTTTGTTGGTAGTCACAAAACTGAATTATCAGATATCGAAGATACTAAGCCTAATATTCAGCCACGTGTCACTGCTCTCCCACCACCTCCACCGCCACAATCAGCGGCGGCGGGGATGACGGACTACATGTACTTCGACAATTCCGATTCGATTCCGAAGCTGCATACTGATTCAAGCTGCTCGGAGCACGTGGTGTCGCCGGAGTTTGCAAGCGAGGTGCAGAGTGAGCCAAAGTGGGACGAGTGGGAGAAAAACCTTGATTTTCCTTATAATTACGTGAATGCCACTCCCGCTGTCAATAACACTGGCTTCGAGGCCCAACAACAACAGTTCCAGAGCAATAATAATAATCAGATGTCGCCGCTGCAGGATATATTCATGTACCTTCAGAAACCCTTTTGA 903 0.4618 MASELQLPPGFRFHPTDEELVMHYLCRKCASQPIVVPIIVEIDLYKYDPWELPGLASYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPICHPKPVGIKKALVFYAGKAPKGDKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGAIEKQPNTFVGSHKTELSDIEDTKPNIQPRVTALPPPPPPQSAAAGMTDYMYFDNSDSIPKLHTDSSCSEHVVSPEFASEVQSEPKWDEWEKNLDFPYNYVNATPAVNNTGFEAQQQQFQSNNNNQMSPLQDIFMYLQKPF 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0473 300 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Lal17g0473 300 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Lal17g0473 300 PANTHER NAC TRANSCRIPTION FACTOR 56 2 268 - -
Lal17g0473 300 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Lal17g0473 300 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Lal17g0473 300 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 2 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0473 Lal-Chr17 3244780 3247249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0473 1 300 NAC Transcription Factor Family AT1G01720 69.231 1.33e-147 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal17g0473 NAM 1.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0473 - - gmx:100805768 481.87