Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0464 ATGGAGGAGCAAAATGGTAGTGCCAAGTTTAGCACGGTTCGTAAGTTGAAGCCTTACCTTGCTATGGTGTCCCTTCAGTTTGGGTATTCTGGAATGTATATCATTACTATGGTTTCTTTTAAACATGGCATGAGCCATTGGATACTCTCCGTGTACCGTCATGTAGTTGCAGCTCTTTTAATAATCCCTTTTGCACTTGTCCTTGAAAGAAAGATAAGGCCAAAGATGACTCTCCAAATCTTCCTGAGGATAGTGGCTCTTGGTTTCCTTGAGCCAGTGCTTGATCAGAACTTGTACAACATGGGAATGAAGATGACCTCAACAACGTTTGCATCCGCCACTATAAATGTCTTGCCGGCCATTACTTTTGTTATGGCACTTATTTTCAGGTTAGAGAAGGTGAACTTCAGAAAATTTCACAGCGTGGCCAAGTTAATTGGAACTGCAATAACAGTCTCAGGAGCCATGGTTATGACCTTGTACAAAGGTCCTGCCTTTAGGATTATAAAGGGCGGAGGAGCAATCAGCCACCACGCCTCTGCCACAGCCACCGAGCCCTCTGACCAGCACCAAGTTATCGGCACACTAGAGCTCATTGCAAGTTTATGTGGTTGGGCTGGTTTCTTCATTTTGCAATCATTCACTTTGAAGAAGTACCCAGCAGAACTTTCACTCACAGCTTGGATTTGTGTGATGGGTATCATTGAGGGTTCAATTGCTTCTTTTATATTTGAACGTGACTTGAGCGTTTGGGCTATAGGGTGGGACTCAAGGCTTCTTGCTTGTGTTTATTCTGGGGTGGTGTGTTCTGGAATGGCATACTACGTACAAGGAGTTGTGACAAGGGAACGTGGACCAGTATTTGTTACATCTTTCAGCCCTCTATGTATGATTATCACAGCTGCATTGGGCTCTCTTGTCTTAGCTGAGAAAGTTCACCTAGGAAGTATATTTGGAGCTATTCTCATTGTGTTGGGACTTTACACTGTGGTATGGGGCAAAAGCAAAGACCGTCCTACAGAGTTAGAGAAAGAAGGTCAAGATTTACCTATAAAGGATGGTACAAAATCAGGGTTAGAAATTTCCGAGTGCATTGAGATCAATGATTATACTGATAACATTTTAAAGAAAGGGGCTGGGAATACTGCCCCACCAGCACCAAGATCATGA 1170 0.4342 MEEQNGSAKFSTVRKLKPYLAMVSLQFGYSGMYIITMVSFKHGMSHWILSVYRHVVAALLIIPFALVLERKIRPKMTLQIFLRIVALGFLEPVLDQNLYNMGMKMTSTTFASATINVLPAITFVMALIFRLEKVNFRKFHSVAKLIGTAITVSGAMVMTLYKGPAFRIIKGGGAISHHASATATEPSDQHQVIGTLELIASLCGWAGFFILQSFTLKKYPAELSLTAWICVMGIIEGSIASFIFERDLSVWAIGWDSRLLACVYSGVVCSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAEKVHLGSIFGAILIVLGLYTVVWGKSKDRPTELEKEGQDLPIKDGTKSGLEISECIEINDYTDNILKKGAGNTAPPAPRS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0464 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 336 - -
Lal17g0464 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Lal17g0464 389 Pfam EamA-like transporter family 30 146 IPR000620 GO:0016020|GO:0016021
Lal17g0464 389 Pfam EamA-like transporter family 195 331 IPR000620 GO:0016020|GO:0016021
Lal17g0464 389 PANTHER WAT1-RELATED PROTEIN 12 346 - -
Lal17g0464 389 PANTHER WAT1-RELATED PROTEIN 12 346 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0464 Lal-Chr17 3191908 3195608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0464 15 353 Nodulin-like Gene Family AT4G08300 67.251 2.11e-168 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0464 - - gmx:100811114 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0464 17 3191908 3195608 Lal17g0464 17 3191908 3195608 ECH