Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0455 ATGAGTAAACCCAAAACCATTAGAAAACCAACCATTACTAAGGTTATCAGCAATGACCAAAACCAACAACCTCAGAAGACAGAAAAACAACCCTCATGGTCAGTAAGAGGTTTTTTAGCTTGTAGGAATGTCCAAATTCAGCAACAGCAGCCGAAACAACCACAACCACAACCACGACCGCAACCGCTACAGTTAGATGAAGCAAAACAATCAAGGAAGAAACATGAACATAAAAAGGTACAAACAGAAAGAGTCACACATGAAGAAAACAACAAGAAGTGCAAGAAGATGAAATGTTCAGGTTCACTTTGCAATAACACCAAAGTCATGGCAAGGCCTGAAACAGGAACTCCTGATATTCACAAGAAGAGGGTGTCACTGAGTGGTTCATGTAGTAACAACAATGATGGTTCTAGCAGCAGATCCATGAAGGGACCATTGAATGAAATCAATGGAACTGTGTCAGCATCTTCTTCTTCACTTTCAGAAGCATCTTCTGGTTCTTCTGCTGCTACTGGCTCTTTTAAGGGAATGCCATTCAGGAGACTCTCTGGTTGTTATGAGTGTAGAATGGTTGTTGACCCTGTTCTTGGTTTCACTAGAGACCCTTCTCTTAGGAGTAGCATTTGTTCTTGTCCTGATTGTGGTGAAATCATGAAAACTGAAAGTTTGGAACATCATCAGGCTGTTAAACATGCAGTTTCAGAGCTGGGTCCAGAAGATACAAGCAAGAACATAGTTGAAATTATATTCCACTCAAGCTGGCTAAAGAAGCAATCACCGGTATGCAAAATCGACCGCATCCTTAAGGTTCACAACACTCAAAAAACCATCACAAAATTTGAAGAGTACAGAGACTCCATCAAAGCAAAGGCCACAAAGCTATCCAAAAAGCATCCTCGTTGCGTAGCAGATGGAAATGAATTACTTAGGTTCCAATGCACTACTTTCATGTGCTCATTAGGCCTAAATGGTTCTTCAAACCTTTGCAACTCAATACCACAATGCAATGTGTGTAGCATAATCAAACTTGGGTTCAAAACCAATGGTGGAAATGGGAATGGTATATTAACAACCGCGACAAGCGGTAAGGCGCACGATAAGGCGAGTGTTTCGATCGATGAATGTAGTGACAAAAGGGCAATGCTGGTTTGCAGGGTGATAGCAGGCAGGGTGAAGAAGAATGCAGAAGGTGGAATGGAAGAGTATGATTCTGTTGCAGTTGCTGGTGCTGTTGGGGCCTATTCAAATTTGGATGAGTTATATGTGTTTAATCATAGAGCTATTTTGCCTTGTTTTGTTGTAATCTATAGTGGTTTTTGA 1323 0.4112 MSKPKTIRKPTITKVISNDQNQQPQKTEKQPSWSVRGFLACRNVQIQQQQPKQPQPQPRPQPLQLDEAKQSRKKHEHKKVQTERVTHEENNKKCKKMKCSGSLCNNTKVMARPETGTPDIHKKRVSLSGSCSNNNDGSSSRSMKGPLNEINGTVSASSSSLSEASSGSSAATGSFKGMPFRRLSGCYECRMVVDPVLGFTRDPSLRSSICSCPDCGEIMKTESLEHHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQKTITKFEEYRDSIKAKATKLSKKHPRCVADGNELLRFQCTTFMCSLGLNGSSNLCNSIPQCNVCSIIKLGFKTNGGNGNGILTTATSGKAHDKASVSIDECSDKRAMLVCRVIAGRVKKNAEGGMEEYDSVAVAGAVGAYSNLDELYVFNHRAILPCFVVIYSGF 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0455 440 Coils Coil 65 85 - -
Lal17g0455 440 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 72 438 - -
Lal17g0455 440 MobiDBLite consensus disorder prediction 126 173 - -
Lal17g0455 440 SUPERFAMILY ADP-ribosylation 234 439 - -
Lal17g0455 440 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 72 438 - -
Lal17g0455 440 MobiDBLite consensus disorder prediction 110 174 - -
Lal17g0455 440 Gene3D - 233 438 - -
Lal17g0455 440 MobiDBLite consensus disorder prediction 1 91 - -
Lal17g0455 440 MobiDBLite consensus disorder prediction 11 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0455 Lal-Chr17 3126102 3128246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0455 175 437 C2H2 Transcription Factor Family AT1G75710 53.535 4.59e-97 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0455 - - gmx:100817333 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0455 17 3126102 3128246 Lal17g0455 17 3126102 3128246 ECH
Lal17g0455 17 3126102 3128246 Lal21g0509 21 3652006 3654294 LSH