Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0454 ATGGATCATGATAACCCTAATTCCTCTTCTTCTTTCTCTTCCCATTCATCTCCGCCGGGCCTCATTCGCCACTTTCAAGCCGCTTTGAAGCGCCATCGCCCTCTCGGTATAATGCAACAGTCTAATTCTTTGAAGCCAAAGCGCGTTCTGCTTCCGAAACGAAATGTGTCTAAGGATGTGAAGAAATCTCATGATATGTCATTGAAGGAGTCAATTTTACATAATAACAATACTCCATCTGATTCTGATACAACACCTCCATCTATTTTGACTTTTGATGAAGCTTCCAATCCATTTGTTACACAGGAACAACAACATTACGATAAACATGATGTGCCTTCTACGCAGGTACAATCTCAAAATGTTGATGCTCACAAGAAAGTCAACTTCTCTGTTCAAAATAACATTGCTCCCCATGGGGCCAATGATGGAAAGGCCACTGAGTTGGACAACTTATCATCTCATATGAGTTCACTTGGATTCACAGAAATGGACTGGGTTGAAAGCGGTCAACTTGAACCATCAATTGAAGAATCAAAGCTTCAAAAAATCCAGGAGGCAGAGCATGACACAAGTGTGAGAGCTGAGAGAGGAGTAAGTTCTATGTTGCCAAAGAGATCAGTAAATACTCAGGATCTTATGCAGGATTTCAAGAACTTTTTAGGTCATCCGGCAACGCAAAGTTCGGCGATGGGGACTTCATGTGCTACAACTACCTCAGTCAATTCATCCTCAGCTCCCATGCTTAACTCAGCATCCCATTATTCTCATTTGTATCTAGATAGTGGCTCTCACGTGGCTGCAGAACCTTTGGGTGAGCCTAATGTTAATCCTAATCCTATAACTGAAGGGATTATGAAATCATCAAATAGTTCCCTAAAAGACGCCAATAGAATGTCCATTGATCAAGCACCAATTGCAGTACAAGGTTCTGGCTCTTTCGTTGATTCAGAATTGGCATTTAAGGAGGGGGATCTATCTAAGGAGCAACAAGGGTGCAGTTCAAAAGAAACCAGAATTTCAAAATATACTTCTTATCATGATGACAAGTCAACTAAAGGGGAAGAACTTGCAGATGTTAACATCCAAACTCAGGCTCCAATGACCAAAACCTCATCTTCAGATGTGAAGTTGGAATCTTCGAAGTTAGAAAAGCGAGAGAAGGCCGCAAGTGGTAAAGGTTCGTCAGCCTCTCGGAGAAAGACATATGACCCTAATTTGTTTTTTGAAGTCAATGGCAAGCTTTATCAAAGGCTTGGCAAGATAGGTAGTGGTGGAAGCAGTGAGGTTCACAAAGTGATTTCATCAGACTGTAAGATCTATGCACTTAAAAAGATCAAGCTCAAGGGTCATGATTATGCTACTGCGTTTGGGTTTTGTCAAGAGATCGAGTATCTAAATAGACTCAAAGGAAAGGATAATATCATACAGCTTATAGATTTTGAGGTTACTGACAAGGCATTGCTTAAGGAGGTAATGAAAGGCTCCATCAGTAATAGGGGTGGCCGAGTCAAGAATGATGGATATATATACATGGTACTTGAATATGGGGAAATCGATCTGGCTCACATGTTGTCCCAGAAGTGGAGGGAACTGAATGGACACGACCAGACCATTGATGAGAACTGGCTTCGGTTTTATTGGCAGCAAATTCTTCAATCTGTCAGAACTATTCATGAGGAGCGTATTGTGCACTCTGACTTGAAGCCAGCTAACTTCCTTCTTGTCAAAGGTTCCCTAAAATTGATTGATTTTGGTATAGCCAAAGCAATAATGAACGATACAACTAACATCCAGCGGGATTCACAGGTGGGTACTCTCAGTTACATGTCTCCAGAAGCATTTCTGTGTAATGAGAGTGACACAAACGGAAACATCATTAAGTGTGGTAGGTCATCAGATATCTGGTCCCTGGGTTGCATCCTTTATCAAATGGTATATGGGAGAACCCCCTTTTCAGAGTACAAGACATTTTGGGGAAAGTTCAAAGTTATAACAGATCCAAACTATGAAATTACGTATGAACCAGTTTCAAATCCATGGCTTATGGATCTTATGAAGAGGTGTCTAGCATGGGATCGCAATCAAAGGTGGAGAATTCCTGAGCTACTCCAACACCCTTTTCTTGTTCCTCCCGTGCCATGCCATCAACCATCTTTGGACCAAGATCTAAGCTGTAAATTGCTACAACTTATTGCAGAAACTTGTAAAAATGACCCTGAAGCATCCCAGCTATGTTGTCAGCTCCAACAGGTTCTTGATGATCCCCTTAAGTTGATAACTCCCCACTCACTAAAATCACGAGATCAACAACTAAAACTGCTGTCTCGGATGTCAGAACTCAATATTCAGCTGCAGGAATGTTTAAAAAATACTGATAACTAG 2385 0.413 MDHDNPNSSSSFSSHSSPPGLIRHFQAALKRHRPLGIMQQSNSLKPKRVLLPKRNVSKDVKKSHDMSLKESILHNNNTPSDSDTTPPSILTFDEASNPFVTQEQQHYDKHDVPSTQVQSQNVDAHKKVNFSVQNNIAPHGANDGKATELDNLSSHMSSLGFTEMDWVESGQLEPSIEESKLQKIQEAEHDTSVRAERGVSSMLPKRSVNTQDLMQDFKNFLGHPATQSSAMGTSCATTTSVNSSSAPMLNSASHYSHLYLDSGSHVAAEPLGEPNVNPNPITEGIMKSSNSSLKDANRMSIDQAPIAVQGSGSFVDSELAFKEGDLSKEQQGCSSKETRISKYTSYHDDKSTKGEELADVNIQTQAPMTKTSSSDVKLESSKLEKREKAASGKGSSASRRKTYDPNLFFEVNGKLYQRLGKIGSGGSSEVHKVISSDCKIYALKKIKLKGHDYATAFGFCQEIEYLNRLKGKDNIIQLIDFEVTDKALLKEVMKGSISNRGGRVKNDGYIYMVLEYGEIDLAHMLSQKWRELNGHDQTIDENWLRFYWQQILQSVRTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMNDTTNIQRDSQVGTLSYMSPEAFLCNESDTNGNIIKCGRSSDIWSLGCILYQMVYGRTPFSEYKTFWGKFKVITDPNYEITYEPVSNPWLMDLMKRCLAWDRNQRWRIPELLQHPFLVPPVPCHQPSLDQDLSCKLLQLIAETCKNDPEASQLCCQLQQVLDDPLKLITPHSLKSRDQQLKLLSRMSELNIQLQECLKNTDN 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0454 794 MobiDBLite consensus disorder prediction 70 92 - -
Lal17g0454 794 CDD PKc_Mps1 414 709 - -
Lal17g0454 794 MobiDBLite consensus disorder prediction 1 92 - -
Lal17g0454 794 Gene3D Phosphorylase Kinase; domain 1 409 496 - -
Lal17g0454 794 MobiDBLite consensus disorder prediction 377 394 - -
Lal17g0454 794 ProSitePatterns Protein kinases ATP-binding region signature. 422 444 IPR017441 GO:0005524
Lal17g0454 794 Gene3D Transferase(Phosphotransferase) domain 1 530 711 - -
Lal17g0454 794 MobiDBLite consensus disorder prediction 1 20 - -
Lal17g0454 794 MobiDBLite consensus disorder prediction 269 294 - -
Lal17g0454 794 SMART serkin_6 416 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0454 794 MobiDBLite consensus disorder prediction 52 69 - -
Lal17g0454 794 PANTHER MIXED LINEAGE PROTEIN KINASE 8 764 - -
Lal17g0454 794 PANTHER DUAL SPECIFICITY PROTEIN KINASE TTK 8 764 IPR027084 GO:0004712|GO:0007093|GO:0051304
Lal17g0454 794 MobiDBLite consensus disorder prediction 357 376 - -
Lal17g0454 794 ProSiteProfiles Protein kinase domain profile. 416 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0454 794 SUPERFAMILY Protein kinase-like (PK-like) 410 718 IPR011009 -
Lal17g0454 794 MobiDBLite consensus disorder prediction 345 399 - -
Lal17g0454 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 563 575 IPR008271 GO:0004672|GO:0006468
Lal17g0454 794 Pfam Protein kinase domain 416 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0454 Lal-Chr17 3114691 3120727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0454 422 710 MAP Kinase Kinase Kinase AT4G08470 28.136 2.28e-22 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Lal17g0454 Pkinase 3.3e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0454 K08866 - gmx:100788990 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0454 17 3114691 3120727 Lal17g0454 17 3114691 3120727 ECH
Lal17g0454 17 3114691 3120727 Lal21g0507 21 3633109 3640152 LSH