Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0449 ATGGCTACTTCCGTCCATAACCGTCAATACACTGTTCTCCAATCCCCTATTAACGGCGTCCCTCGCACCTTCAACCCCAAAATCTCACCCCAACCACACATCCATTTCGATAACATGGACAATGATTTTTCTTCTGACGACGAAAACGACGATGTTGCCAATTTAAATGACCTCATCTCAAAGGGTAACGCCGAAATTGAATCCTCAATCTACGACCCACGTGACAACGGCACATCAGACCACTGGATCCAACGTAACACCACCCTGATCCGCCTCACCGGAAAACACCCCTTCAATTCCGAACCACCACTTCCTCGCCTCATGCACCACGGCTTCATCACCCCAGTCCCAATCCACTACGTCCGTAGCCACGGTCCAGTCCCAAGGATCAACTGGGATGACTGGACCGTGGAAGTAACCGGTCTAGTGAATCGGCCAACCCGATTCACCATGGACCAACTAGTTAACAACTTTCCATCCCGCGAGTTCCCAGCCACACTGGTGTGCGCTGGGAACCGCAGGAAGGAACAAAACCTTGTTAAACAGAGCATAGGGTTCAATTGGGGCGCTGCCGGGGTTTCCACTTCGGTGTGGAAGGGTGTACCGTTGTATAGCATACTCAAGCAGTGCGGGATCTATAACCGCACGAAAGGAGCCTTACATGTTTGTTTCGAAGGCGCTGAGGATTTGCCAGGTGGCGGTGATGGGTCCAAATATGGAACGAGTATCATGAGGGATGTTGCACTGGATCGCTCCCGCGATATTATACTTGCTTACATGCAAAACGGCGAGCGTTTAACACCAGATCATGGTTTCCCTGTAAGGATTATTGTACCAGGTTTCATTGGTGGACGCATGGTGAAATGGTTGAAACGCATCATCGTAACTACTCAGCAATCTGATAATTACTATCATTATAAGGACAATAGGGTACTTCCCTCCCACGTTGATGCTGAGCTTGCCAATGCAGAAGCTTGGTGGTACAAGCCAGAGTATATTATCAATGAAGTGAATATAAACTCGGTGATAACGACGCCGTGTCATGATGAGATCTTGCCCATAAACTCATGGACTACTCAGAGGCCTTATGTTCTTAAAGGCTATGCTTATTCAGGGGGTGGGAGAAAAGTGACACGTGTAGAGGTGACAATGGATGGTGGTGAAACATGGCAAGTGAGCACGTTGAACCATGAAGAGAAACCCAACAAATATGGGAAGTATTGGTGTTGGTGCTTCTGGTCGTTGGAGGTGGAAGTGTTGGACATACTTGGAGCTAAGGAAATTGCAGTGCGTGCTTGGGATGAGGCTCTTAATACCCAGCCTGAGAAGCTTATTTGGAATCTTATGGGAATGATGAACAATTGTTGGTTCAGAGTGAAGAGTAACGTATGCAAGCCCCACAAGGGTGAGATTGGCATAGTGTTCGAGCACCCAACCCAACCAGGGAACCAATCTGGTGGGTGGATGGCCAAAGAAAGACACCTTGAGAAATCTTCAGATACTTCCTCTTCTTCCCTCAAAAAAAGTGTATCCTCTCCCTTCATGAACACCACCTCTAAAACATTCTCAATCTCTGAAGTCAACAAACACTCCAACCCTGATTCAGCTTGGATCATTGTCCATGGCCAAGTTTATGATTGCACCACCTTCCTCAAACATCACCCTGGTGGCAAAGATAGCATCCTCATCAATGCTGGCACTGATTGCACTGAAGAATTTCATGCAATCCATTCCAATAAAGCTAAAGAAATGCTCGAAAGCTACCGAATTGGGGAGCTTGTTACCACTGGATACACCTCCGATTCATCAACATCTTCACCAAATAACACAATGCATGGAAGTTCAGAATTCACCCATTTGGCAACCATCAAAGAAGTTACACTACCATCACAAAGTATAGCTCTTAACCCACGTGAGAAAATCCCATGCAAGCTTCTTTCCAAAACCTCCATCTCACACGACGTTAGGCTCTTCCGGTTCGCGTTACCCTCCAATGCCCAGCTTCTAGGGTTGCCGGTGGGGAAGCACATTTTCTTATGTGCCACCATCAACGAGAAGCTTTGCATGCGTGCTTACACTCCAACCAGTACAGTTGATGAATTGGGTTATTTTGAACTATTGGTTAAGATTTACTTAAAAAATGTGCACCCAAAGTTCCCTAATGGTGGCCTCATGTCACAACACTTGGACTCACTCCCTATTGGTTCATTTCTAGACGTGAAAGGTCCATTAGGTCACATTGAGTATACTGGCAAAGGAAACTTTCTTGTTCATGGACAACACAAGTTTGCAAAAAGGTTAGCCATGTTGGCTGGTGGAACAGGAATCACACCTATTTACCAAGTGGCACAAGCGATTTTGAAGGACCCAACTGATGAAACTGAAATGCATGTTATATATGCGAACCGGACAGAGGATGATATATTGCTTAGGGAAGAGCTTGATGATTGGTCTAAGAAGTATGATAGGTTCAAGGTTTGGTATGTGGTACAAGAGAGTATTAGAGAAGGGTGGGAATACAGTGTGGGGTTCATCACTGAGAGTGTCATGAGGGAACATCTTCCAGAGGCTTCGGATGACACGTTGGCGTTGACTTGTGGACCACCACCTATGATTCAGTTTGCAGTTCAGCCCAATTTGGAAAAGTTCGGGTATGACATCAAGAACAACTTGCTCTTGTTTTAG 2685 0.4618 MATSVHNRQYTVLQSPINGVPRTFNPKISPQPHIHFDNMDNDFSSDDENDDVANLNDLISKGNAEIESSIYDPRDNGTSDHWIQRNTTLIRLTGKHPFNSEPPLPRLMHHGFITPVPIHYVRSHGPVPRINWDDWTVEVTGLVNRPTRFTMDQLVNNFPSREFPATLVCAGNRRKEQNLVKQSIGFNWGAAGVSTSVWKGVPLYSILKQCGIYNRTKGALHVCFEGAEDLPGGGDGSKYGTSIMRDVALDRSRDIILAYMQNGERLTPDHGFPVRIIVPGFIGGRMVKWLKRIIVTTQQSDNYYHYKDNRVLPSHVDAELANAEAWWYKPEYIINEVNINSVITTPCHDEILPINSWTTQRPYVLKGYAYSGGGRKVTRVEVTMDGGETWQVSTLNHEEKPNKYGKYWCWCFWSLEVEVLDILGAKEIAVRAWDEALNTQPEKLIWNLMGMMNNCWFRVKSNVCKPHKGEIGIVFEHPTQPGNQSGGWMAKERHLEKSSDTSSSSLKKSVSSPFMNTTSKTFSISEVNKHSNPDSAWIIVHGQVYDCTTFLKHHPGGKDSILINAGTDCTEEFHAIHSNKAKEMLESYRIGELVTTGYTSDSSTSSPNNTMHGSSEFTHLATIKEVTLPSQSIALNPREKIPCKLLSKTSISHDVRLFRFALPSNAQLLGLPVGKHIFLCATINEKLCMRAYTPTSTVDELGYFELLVKIYLKNVHPKFPNGGLMSQHLDSLPIGSFLDVKGPLGHIEYTGKGNFLVHGQHKFAKRLAMLAGGTGITPIYQVAQAILKDPTDETEMHVIYANRTEDDILLREELDDWSKKYDRFKVWYVVQESIREGWEYSVGFITESVMREHLPEASDDTLALTCGPPPMIQFAVQPNLEKFGYDIKNNLLLF 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0449 894 PRINTS Eukaryotic molybdopterin domain signature 90 104 IPR008335 GO:0016491
Lal17g0449 894 PRINTS Eukaryotic molybdopterin domain signature 112 128 IPR008335 GO:0016491
Lal17g0449 894 PRINTS Eukaryotic molybdopterin domain signature 165 176 IPR008335 GO:0016491
Lal17g0449 894 PRINTS Eukaryotic molybdopterin domain signature 176 188 IPR008335 GO:0016491
Lal17g0449 894 PRINTS Eukaryotic molybdopterin domain signature 191 206 IPR008335 GO:0016491
Lal17g0449 894 PRINTS Eukaryotic molybdopterin domain signature 250 266 IPR008335 GO:0016491
Lal17g0449 894 PRINTS Eukaryotic molybdopterin domain signature 267 280 IPR008335 GO:0016491
Lal17g0449 894 PRINTS Eukaryotic molybdopterin domain signature 283 296 IPR008335 GO:0016491
Lal17g0449 894 PRINTS Eukaryotic molybdopterin domain signature 334 346 IPR008335 GO:0016491
Lal17g0449 894 PRINTS Eukaryotic molybdopterin domain signature 365 379 IPR008335 GO:0016491
Lal17g0449 894 PRINTS Eukaryotic molybdopterin domain signature 379 391 IPR008335 GO:0016491
Lal17g0449 894 PRINTS Eukaryotic molybdopterin domain signature 406 416 IPR008335 GO:0016491
Lal17g0449 894 PRINTS Eukaryotic molybdopterin domain signature 431 443 IPR008335 GO:0016491
Lal17g0449 894 PRINTS Eukaryotic molybdopterin domain signature 444 457 IPR008335 GO:0016491
Lal17g0449 894 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 553 563 IPR001709 GO:0016491
Lal17g0449 894 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 690 697 IPR001709 GO:0016491
Lal17g0449 894 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 768 787 IPR001709 GO:0016491
Lal17g0449 894 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 794 803 IPR001709 GO:0016491
Lal17g0449 894 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 806 817 IPR001709 GO:0016491
Lal17g0449 894 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 838 854 IPR001709 GO:0016491
Lal17g0449 894 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 862 870 IPR001709 GO:0016491
Lal17g0449 894 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 519 594 IPR001199 -
Lal17g0449 894 PANTHER NADH-CYTOCHROME B5 REDUCTASE 50 894 IPR001834 GO:0016491
Lal17g0449 894 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 141 176 IPR022407 GO:0043546
Lal17g0449 894 Gene3D - 336 512 - -
Lal17g0449 894 Gene3D - 745 894 IPR039261 -
Lal17g0449 894 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 738 888 IPR039261 -
Lal17g0449 894 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 73 334 IPR036374 -
Lal17g0449 894 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 517 597 IPR036400 -
Lal17g0449 894 Pfam Oxidoreductase molybdopterin binding domain 124 304 IPR000572 -
Lal17g0449 894 PRINTS Cytochrome B5 signature 544 554 IPR001199 -
Lal17g0449 894 PRINTS Cytochrome B5 signature 554 568 IPR001199 -
Lal17g0449 894 PRINTS Cytochrome B5 signature 569 576 IPR001199 -
Lal17g0449 894 PRINTS Cytochrome B5 signature 581 593 IPR001199 -
Lal17g0449 894 SUPERFAMILY E set domains 336 463 IPR014756 -
Lal17g0449 894 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 550 557 IPR018506 GO:0020037
Lal17g0449 894 Gene3D - 515 597 IPR036400 -
Lal17g0449 894 PIRSF Nitr_rd_NADH 6 893 IPR012137 GO:0006809|GO:0042128|GO:0050464
Lal17g0449 894 PANTHER NITRATE REDUCTASE 50 894 - -
Lal17g0449 894 Pfam Oxidoreductase FAD-binding domain 643 749 IPR008333 -
Lal17g0449 894 MobiDBLite consensus disorder prediction 482 512 - -
Lal17g0449 894 Pfam Oxidoreductase NAD-binding domain 769 876 IPR001433 GO:0016491
Lal17g0449 894 CDD cyt_b5_reduct_like 643 894 - -
Lal17g0449 894 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 638 750 IPR017927 GO:0016491
Lal17g0449 894 Gene3D - 94 335 IPR036374 -
Lal17g0449 894 PRINTS Cytochrome B5 reductase signature 669 680 - -
Lal17g0449 894 PRINTS Cytochrome B5 reductase signature 690 697 - -
Lal17g0449 894 PRINTS Cytochrome B5 reductase signature 735 749 - -
Lal17g0449 894 PRINTS Cytochrome B5 reductase signature 768 787 - -
Lal17g0449 894 PRINTS Cytochrome B5 reductase signature 806 817 - -
Lal17g0449 894 PRINTS Cytochrome B5 reductase signature 862 870 - -
Lal17g0449 894 SUPERFAMILY Riboflavin synthase domain-like 633 751 IPR017938 -
Lal17g0449 894 Gene3D Translation factors 630 744 - -
Lal17g0449 894 CDD eukary_NR_Moco 75 460 - -
Lal17g0449 894 Pfam Mo-co oxidoreductase dimerisation domain 332 461 IPR005066 GO:0016491|GO:0030151
Lal17g0449 894 Pfam Cytochrome b5-like Heme/Steroid binding domain 525 593 IPR001199 -
Lal17g0449 894 SMART Cyt_b5_2 522 594 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0449 Lal-Chr17 3069367 3074235 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0449 631 885 NADPH P450 reductases AT5G17770 39.689 3.09e-52 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0449 K10534 - gmx:732634 1492.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0449 17 3069367 3074235 Lal17g0449 17 3069367 3074235 ECH