LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal17g0449	ATGGCTACTTCCGTCCATAACCGTCAATACACTGTTCTCCAATCCCCTATTAACGGCGTCCCTCGCACCTTCAACCCCAAAATCTCACCCCAACCACACATCCATTTCGATAACATGGACAATGATTTTTCTTCTGACGACGAAAACGACGATGTTGCCAATTTAAATGACCTCATCTCAAAGGGTAACGCCGAAATTGAATCCTCAATCTACGACCCACGTGACAACGGCACATCAGACCACTGGATCCAACGTAACACCACCCTGATCCGCCTCACCGGAAAACACCCCTTCAATTCCGAACCACCACTTCCTCGCCTCATGCACCACGGCTTCATCACCCCAGTCCCAATCCACTACGTCCGTAGCCACGGTCCAGTCCCAAGGATCAACTGGGATGACTGGACCGTGGAAGTAACCGGTCTAGTGAATCGGCCAACCCGATTCACCATGGACCAACTAGTTAACAACTTTCCATCCCGCGAGTTCCCAGCCACACTGGTGTGCGCTGGGAACCGCAGGAAGGAACAAAACCTTGTTAAACAGAGCATAGGGTTCAATTGGGGCGCTGCCGGGGTTTCCACTTCGGTGTGGAAGGGTGTACCGTTGTATAGCATACTCAAGCAGTGCGGGATCTATAACCGCACGAAAGGAGCCTTACATGTTTGTTTCGAAGGCGCTGAGGATTTGCCAGGTGGCGGTGATGGGTCCAAATATGGAACGAGTATCATGAGGGATGTTGCACTGGATCGCTCCCGCGATATTATACTTGCTTACATGCAAAACGGCGAGCGTTTAACACCAGATCATGGTTTCCCTGTAAGGATTATTGTACCAGGTTTCATTGGTGGACGCATGGTGAAATGGTTGAAACGCATCATCGTAACTACTCAGCAATCTGATAATTACTATCATTATAAGGACAATAGGGTACTTCCCTCCCACGTTGATGCTGAGCTTGCCAATGCAGAAGCTTGGTGGTACAAGCCAGAGTATATTATCAATGAAGTGAATATAAACTCGGTGATAACGACGCCGTGTCATGATGAGATCTTGCCCATAAACTCATGGACTACTCAGAGGCCTTATGTTCTTAAAGGCTATGCTTATTCAGGGGGTGGGAGAAAAGTGACACGTGTAGAGGTGACAATGGATGGTGGTGAAACATGGCAAGTGAGCACGTTGAACCATGAAGAGAAACCCAACAAATATGGGAAGTATTGGTGTTGGTGCTTCTGGTCGTTGGAGGTGGAAGTGTTGGACATACTTGGAGCTAAGGAAATTGCAGTGCGTGCTTGGGATGAGGCTCTTAATACCCAGCCTGAGAAGCTTATTTGGAATCTTATGGGAATGATGAACAATTGTTGGTTCAGAGTGAAGAGTAACGTATGCAAGCCCCACAAGGGTGAGATTGGCATAGTGTTCGAGCACCCAACCCAACCAGGGAACCAATCTGGTGGGTGGATGGCCAAAGAAAGACACCTTGAGAAATCTTCAGATACTTCCTCTTCTTCCCTCAAAAAAAGTGTATCCTCTCCCTTCATGAACACCACCTCTAAAACATTCTCAATCTCTGAAGTCAACAAACACTCCAACCCTGATTCAGCTTGGATCATTGTCCATGGCCAAGTTTATGATTGCACCACCTTCCTCAAACATCACCCTGGTGGCAAAGATAGCATCCTCATCAATGCTGGCACTGATTGCACTGAAGAATTTCATGCAATCCATTCCAATAAAGCTAAAGAAATGCTCGAAAGCTACCGAATTGGGGAGCTTGTTACCACTGGATACACCTCCGATTCATCAACATCTTCACCAAATAACACAATGCATGGAAGTTCAGAATTCACCCATTTGGCAACCATCAAAGAAGTTACACTACCATCACAAAGTATAGCTCTTAACCCACGTGAGAAAATCCCATGCAAGCTTCTTTCCAAAACCTCCATCTCACACGACGTTAGGCTCTTCCGGTTCGCGTTACCCTCCAATGCCCAGCTTCTAGGGTTGCCGGTGGGGAAGCACATTTTCTTATGTGCCACCATCAACGAGAAGCTTTGCATGCGTGCTTACACTCCAACCAGTACAGTTGATGAATTGGGTTATTTTGAACTATTGGTTAAGATTTACTTAAAAAATGTGCACCCAAAGTTCCCTAATGGTGGCCTCATGTCACAACACTTGGACTCACTCCCTATTGGTTCATTTCTAGACGTGAAAGGTCCATTAGGTCACATTGAGTATACTGGCAAAGGAAACTTTCTTGTTCATGGACAACACAAGTTTGCAAAAAGGTTAGCCATGTTGGCTGGTGGAACAGGAATCACACCTATTTACCAAGTGGCACAAGCGATTTTGAAGGACCCAACTGATGAAACTGAAATGCATGTTATATATGCGAACCGGACAGAGGATGATATATTGCTTAGGGAAGAGCTTGATGATTGGTCTAAGAAGTATGATAGGTTCAAGGTTTGGTATGTGGTACAAGAGAGTATTAGAGAAGGGTGGGAATACAGTGTGGGGTTCATCACTGAGAGTGTCATGAGGGAACATCTTCCAGAGGCTTCGGATGACACGTTGGCGTTGACTTGTGGACCACCACCTATGATTCAGTTTGCAGTTCAGCCCAATTTGGAAAAGTTCGGGTATGACATCAAGAACAACTTGCTCTTGTTTTAG	2685	0.4618	MATSVHNRQYTVLQSPINGVPRTFNPKISPQPHIHFDNMDNDFSSDDENDDVANLNDLISKGNAEIESSIYDPRDNGTSDHWIQRNTTLIRLTGKHPFNSEPPLPRLMHHGFITPVPIHYVRSHGPVPRINWDDWTVEVTGLVNRPTRFTMDQLVNNFPSREFPATLVCAGNRRKEQNLVKQSIGFNWGAAGVSTSVWKGVPLYSILKQCGIYNRTKGALHVCFEGAEDLPGGGDGSKYGTSIMRDVALDRSRDIILAYMQNGERLTPDHGFPVRIIVPGFIGGRMVKWLKRIIVTTQQSDNYYHYKDNRVLPSHVDAELANAEAWWYKPEYIINEVNINSVITTPCHDEILPINSWTTQRPYVLKGYAYSGGGRKVTRVEVTMDGGETWQVSTLNHEEKPNKYGKYWCWCFWSLEVEVLDILGAKEIAVRAWDEALNTQPEKLIWNLMGMMNNCWFRVKSNVCKPHKGEIGIVFEHPTQPGNQSGGWMAKERHLEKSSDTSSSSLKKSVSSPFMNTTSKTFSISEVNKHSNPDSAWIIVHGQVYDCTTFLKHHPGGKDSILINAGTDCTEEFHAIHSNKAKEMLESYRIGELVTTGYTSDSSTSSPNNTMHGSSEFTHLATIKEVTLPSQSIALNPREKIPCKLLSKTSISHDVRLFRFALPSNAQLLGLPVGKHIFLCATINEKLCMRAYTPTSTVDELGYFELLVKIYLKNVHPKFPNGGLMSQHLDSLPIGSFLDVKGPLGHIEYTGKGNFLVHGQHKFAKRLAMLAGGTGITPIYQVAQAILKDPTDETEMHVIYANRTEDDILLREELDDWSKKYDRFKVWYVVQESIREGWEYSVGFITESVMREHLPEASDDTLALTCGPPPMIQFAVQPNLEKFGYDIKNNLLLF	894

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal17g0449	894	PRINTS	Eukaryotic molybdopterin domain signature	90	104	IPR008335	GO:0016491
	Lal17g0449	894	PRINTS	Eukaryotic molybdopterin domain signature	112	128	IPR008335	GO:0016491
	Lal17g0449	894	PRINTS	Eukaryotic molybdopterin domain signature	165	176	IPR008335	GO:0016491
	Lal17g0449	894	PRINTS	Eukaryotic molybdopterin domain signature	176	188	IPR008335	GO:0016491
	Lal17g0449	894	PRINTS	Eukaryotic molybdopterin domain signature	191	206	IPR008335	GO:0016491
	Lal17g0449	894	PRINTS	Eukaryotic molybdopterin domain signature	250	266	IPR008335	GO:0016491
	Lal17g0449	894	PRINTS	Eukaryotic molybdopterin domain signature	267	280	IPR008335	GO:0016491
	Lal17g0449	894	PRINTS	Eukaryotic molybdopterin domain signature	283	296	IPR008335	GO:0016491
	Lal17g0449	894	PRINTS	Eukaryotic molybdopterin domain signature	334	346	IPR008335	GO:0016491
	Lal17g0449	894	PRINTS	Eukaryotic molybdopterin domain signature	365	379	IPR008335	GO:0016491

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal17g0449	Lal-Chr17	3069367	3074235	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal17g0449	631	885	NADPH P450 reductases	AT5G17770	39.689	3.09e-52	182

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal17g0449	K10534		-	gmx:732634	1492.25

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal17g0449	17	3069367	3074235	Lal17g0449	17	3069367	3074235	ECH

Showing 1 to 1 of 1 entries