Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0433 ATGAGTTCAATGAGAGCCACTGAGCAAGAGACCCTTGGTTTTGAGGATACTACTCCTCAAACAGAAGGGTCACACTCACACTGGGTGCTGAACCCTCCCAATCCACCATCTCTATGGAACAACCTACTTAGTTCAGTGAAAGACACCAAGTTCTTATTTTCATCCAAGAAAAAAACTTGCCATGGATATACTATTTCATTTTTGGAGAGTTTATTCCCAATCATTAGCTGGTGTAGAAGTTACAAAGCTTCCTATTTTAAAGATGATTTGTTTGCTGGTTTAACTCTTGCCAGCCTCAGCATACCTCAGAGCATAGGATATGCTAATTTAGCAAGACTTGATCCTCAATATGGATTGTATACCAGTGTTGTTCCTCCTTTAATATATGCTGTGATGGGAAGTTCAAGAGAAGTTGCAATTGGACCTGTAGCTGTGGTATCATTGCTGATATCCTCTCAGGTCTCAACAATGATTGATCCTTCTTCCAATCCTGATGCCTACAGAAATTTCGTCTTTACGGCGACCTTATTTGCAGGAATCTTTCAAGTTGCTTTTGGAGTTTTCAGGTTGGGTTTTCTTGTGGATTTTCTTTCACATGCTGCACTTGTAGGATTCATGGCTGGTGCAGCCATCATTATTGGTCTTCAGCAGCTCAAAGGGTTACTGGGGCTAAGTCACTTTACCTCCAACACTGATGTAGTATCTGTGATAGGCTCTGTTTATAAGTCACTCCATCAACAAATCACATCTGAAGAAAAATGGTCCCCCCTGAATTTCATCATCGGGAGTTCATTCCTGATTTTCCTTTTACTTGCTCGGTTCATTAGCAGACGAAACAAGAAACTTTTCTGGTTACCTGCTATTGCTCCTCTTATATCAGTTGTATTATCAACCTTAATAGTGTACTTATCAAAAGCTGATAAACATGGAGTTAATATAATAAAGCATATCAAAAGTGGTCTTAATCCAAGTTCAGTTCATCAGTTACAATTTCATGGTCATGTTGGACAAGCAGCTCAAATTGGATTGATTTCTGCTGTTATTGCTCTCACTGAAGCAATAGCTGTTGGTCGATCTTTTGCTACCATTAAGGGATACCATCTTGATGGAAACAGAGAAATGTTAGCAATGGGTTGCATGAACATTGCTGGTTCTTTAACTTCATGCTATGTGGCAACTGGTTCTTTTTCAAGGACAGCAGTAAATTTCAGTGCAGGATGTAAAACATCAATATCAAATATAGTGATGGGAGTTACTGTGATTTTGTGCCTGGAATTGTTTACAAGGCTCTTATACTATACTCCTATGGCCATACTTGCTTCTATTATCCTCTCTGCACTACCTGGTTTAATTGACATAAATGAAGCTTGCTATATTTGGAAGCTTGACAAATTAGATTTTCTTGCATGTGCTGGTGCTTTCTTTGGTGTCTTGTTTAAATCAGTAGAGACTGGTCTTCTAATTGCTGTGTCAATCTCATTTGCAAAGATACTCATACAATCAATTCGACCAGGGATAGAAATTCTGGGAAGAGTTCCAAGAACAGATGCATTCTGTGATGTTGTTCAATATCCCATGGCAATAAGCACTCCAAGCATCTTAGTTATTCGGATAAGCTCTGGCTCACTATGCTTTGCAAATGCTAATTTTGTTAGAGAAAGAATACTAAAGTTGATCAAGAAAGAGGAAGTTGAGTTAAACGAAGCTGCTAAGGGAAGGGTCAAAGCAGTAATCTTAGACATGACCAACCTGATGAATGTTGACACTTCTGGGATTCTAGCGTTGGAGGAACTGCACAAGAAGTTGCATACACGTGGCATACAATTAGCTGTTGTCAACCCAAGGTGGCTACTAATTCACAAACTTAAACTAGCACACTTTGTGGAAAAAATAGGAAAAGAATTAGTTTTCCTTACTGTTGCTGAAGCTGTAGATGCATGCTTGGCTTCTAAATTTTCCATCCCTTAA 1968 0.3902 MSSMRATEQETLGFEDTTPQTEGSHSHWVLNPPNPPSLWNNLLSSVKDTKFLFSSKKKTCHGYTISFLESLFPIISWCRSYKASYFKDDLFAGLTLASLSIPQSIGYANLARLDPQYGLYTSVVPPLIYAVMGSSREVAIGPVAVVSLLISSQVSTMIDPSSNPDAYRNFVFTATLFAGIFQVAFGVFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGLSHFTSNTDVVSVIGSVYKSLHQQITSEEKWSPLNFIIGSSFLIFLLLARFISRRNKKLFWLPAIAPLISVVLSTLIVYLSKADKHGVNIIKHIKSGLNPSSVHQLQFHGHVGQAAQIGLISAVIALTEAIAVGRSFATIKGYHLDGNREMLAMGCMNIAGSLTSCYVATGSFSRTAVNFSAGCKTSISNIVMGVTVILCLELFTRLLYYTPMAILASIILSALPGLIDINEACYIWKLDKLDFLACAGAFFGVLFKSVETGLLIAVSISFAKILIQSIRPGIEILGRVPRTDAFCDVVQYPMAISTPSILVIRISSGSLCFANANFVRERILKLIKKEEVELNEAAKGRVKAVILDMTNLMNVDTSGILALEELHKKLHTRGIQLAVVNPRWLLIHKLKLAHFVEKIGKELVFLTVAEAVDACLASKFSIP 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0433 655 CDD STAS_SulP_like_sulfate_transporter 524 640 - -
Lal17g0433 655 ProSiteProfiles STAS domain profile. 540 647 IPR002645 -
Lal17g0433 655 PANTHER SLC26A/SULP TRANSPORTER-RELATED 20 652 - -
Lal17g0433 655 PANTHER SULFATE TRANSPORTER 20 652 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal17g0433 655 ProSitePatterns SLC26A transporters signature. 115 136 IPR018045 GO:0008271|GO:0008272
Lal17g0433 655 SUPERFAMILY SpoIIaa-like 530 647 IPR036513 -
Lal17g0433 655 Pfam STAS domain 524 643 IPR002645 -
Lal17g0433 655 MobiDBLite consensus disorder prediction 1 27 - -
Lal17g0433 655 Pfam Sulfate permease family 86 471 IPR011547 GO:0016021
Lal17g0433 655 Gene3D STAS domain 503 650 IPR036513 -
Lal17g0433 655 TIGRFAM sulP: sulfate permease 73 643 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0433 Lal-Chr17 2927786 2933252 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0433 20 651 Inorganic Solute Cotransporters AT5G10180 62.969 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0433 K17469 - gmx:100805269 1011.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0433 17 2927786 2933252 Lal17g0433 17 2927786 2933252 ECH
Lal6g0491 6 3148347 3153026 Lal17g0433 17 2927786 2933252 PCT
Lal17g0433 17 2927786 2933252 Lal6g0491 6 3148347 3153026 PCT