Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0404 ATGGCGGCCACACCTTCCCCTCGCGAAGAGTACGTTTACATGGCGAAGCTCGCGGAGCAAGCCGAGCGTTACGAAGAGATGGTGGAGTTCATGGAGAAGGTCTCCGCCGCCGCTGACAAAGAGGAACTCACCGTCGAAGAGCGAAACCTTCTCTCCGTCGCGTACAAGAACGTGATCGGAGCAAGACGCGCTTCATGGCGTATCATCTCCTCGATCGAGCAGAAGGAGGAGAGTAGAGGCAACGAGGATCACGTTTCCACCATCCGTGACTACCGATCTAAGATCGAATCGGAGCTCTCTAACATCTGCGATGGGATCCTCAAGCTCCTTGACTCGCGTCTCATTCCTTCTGCTTCTTCTGGCGATTCTAAGGTTTTTTACCTTAAGATGAAGGGAGATTATCACAGGTACCTTGCTGAGTTCAAAACTGGAGCTGAGCGTAAGGATGCCGCGGAGAGTACTCTAGCTGCTTACAAATCTGCTCAGGACATTGCAAATACGGAACTGCCTCCAACTCACCCAATTAGGCTTGGTCTTGCTCTAAATTTCTCTGTGTTTTACTATGAAATTCTTAACTCTCCTGATCGTGCTTGCAACCTTGCAAAACAGGCTTTTGATGAAGCAATTGCCGAATTGGATACATTGGGAGAGGAGTCCTACAAGGATAGCACTTTGATTATGCAACTTCTCCGTGACAACCTCACCCTGTGGACCTCTGACATGCAGGATGATGGAACAGATGAAATTAAAGAAACAGCGCCTAAACCAGATGAACAGCAGTGA 783 0.4917 MAATPSPREEYVYMAKLAEQAERYEEMVEFMEKVSAAADKEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIESELSNICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKDAAESTLAAYKSAQDIANTELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGTDEIKETAPKPDEQQ 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0404 260 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Lal17g0404 260 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Lal17g0404 260 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Lal17g0404 260 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Lal17g0404 260 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Lal17g0404 260 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Lal17g0404 260 MobiDBLite consensus disorder prediction 243 260 - -
Lal17g0404 260 MobiDBLite consensus disorder prediction 240 260 - -
Lal17g0404 260 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Lal17g0404 260 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Lal17g0404 260 PANTHER 14-3-3 PROTEIN 5 257 IPR000308 -
Lal17g0404 260 PIRSF 14-3-3 2 250 IPR000308 -
Lal17g0404 260 Coils Coil 14 41 - -
Lal17g0404 260 Gene3D - 1 251 IPR036815 -
Lal17g0404 260 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 5 257 - -
Lal17g0404 260 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Lal17g0404 260 SMART 1433_4 8 251 IPR023410 -
Lal17g0404 260 Pfam 14-3-3 protein 14 238 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0404 Lal-Chr17 2721421 2723592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0404 6 260 14-3-3 family AT1G78300 91.016 5.19e-174 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0404 K06630 - gmx:100792014 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0404 17 2721421 2723592 Lal17g0404 17 2721421 2723592 ECH
Lal17g0404 17 2721421 2723592 Lal21g0475 21 3377145 3381750 LSH
Lal17g0404 17 2721421 2723592 Lal4g0358 4 2428859 2430733 LSH