Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0385 ATGGGTTATTTCTATTGCAATGCCGAATCTACAATCGCAACCTGCGATCCATGCTATTGGGATCTCAACAACACAAAAAACAATTCTACGTCACGAACTATAAGAAAATTTCACTACACTGACCTTGTCGCCGCCACGAACTCTTTCTCCGCCGACAACTTCTTAGGCAAGGGCAGCCACAACAACGTCTACAAAGCCACCATCGACGGCGGAAAACTCATCGCCGCCGTCAAAACAACAAAGCTCACCACTAAAACAGTAGCTTCCCACCATCACATCACCACCTGCACCGGTTGTGGCCACTGTACAAGTCCATTGGAAAACGAGATCGAGATTCTCTCTCATGTAAACAACCCAAGAATCGTTAATCTTATCGGTTTCTCCACTGACCAAAACGACAACAATTTAATCGTCGTTCAATACATGCGTAACGGTTCACTCCACGATTTACTTCATTCCCCGGTTCGACCACCCGGTTGGACCCATCGAATCCGGTTTGCACTCGAAGTTGCTAAAGCGGTTCATACACTTCATTCTTCTAACCCTCCCGTAATCCATCGAGACATTAAATCCTCCAACATTTTAATCGACGACGATAGAAAAGCAAGACTCAGGGATTTTGGACTCGCTCTGAGGGGACACGTGGAGGACATTCGTGTAAAGTGCACTCCACCGACGGGGACGTTAGGGTATCTTGATCCATGCTATCTTGCGCCGGGGGATCTCAGCGCCAAGAGCGATGTGTTTAGTTTTGGGATCTTATTGTTGGAGATCTTAAGTGGAAGGAACGCGATTGATGTTAATTATAGTCCTCATTCGGTGGTGGACTGTGCGGTGCCGCTGATCAAGCGTGGTGAGTTCGCCGAGATTTGTGATCGGCGAATTGGACCGCCGACGAATGATGTGGTTGTGAGGCAGCTGGCGATTCTGGCGGCGAGGTGTGTGAGGTCGACAGTGGAGAGGCGACCGTCGATGGTGGAAGTGGTGGAGTGGGTTAATAACGCGAGGAAGAGGATGAGTACGGTGCAGGGTGGAGTGGGTTGA 1044 0.4933 MGYFYCNAESTIATCDPCYWDLNNTKNNSTSRTIRKFHYTDLVAATNSFSADNFLGKGSHNNVYKATIDGGKLIAAVKTTKLTTKTVASHHHITTCTGCGHCTSPLENEIEILSHVNNPRIVNLIGFSTDQNDNNLIVVQYMRNGSLHDLLHSPVRPPGWTHRIRFALEVAKAVHTLHSSNPPVIHRDIKSSNILIDDDRKARLRDFGLALRGHVEDIRVKCTPPTGTLGYLDPCYLAPGDLSAKSDVFSFGILLLEILSGRNAIDVNYSPHSVVDCAVPLIKRGEFAEICDRRIGPPTNDVVVRQLAILAARCVRSTVERRPSMVEVVEWVNNARKRMSTVQGGVG 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0385 347 PANTHER OS01G0750732 PROTEIN 1 342 - -
Lal17g0385 347 SUPERFAMILY Protein kinase-like (PK-like) 28 333 IPR011009 -
Lal17g0385 347 ProSiteProfiles Protein kinase domain profile. 49 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0385 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Lal17g0385 347 PANTHER - 1 342 - -
Lal17g0385 347 SMART serkin_6 49 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0385 347 Gene3D Phosphorylase Kinase; domain 1 21 141 - -
Lal17g0385 347 Gene3D Transferase(Phosphotransferase) domain 1 142 344 - -
Lal17g0385 347 Pfam Protein kinase domain 52 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0385 Lal-Chr17 2585251 2586294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0385 32 339 Receptor kinase-like Gene Family AT3G59420 37.061 1.85e-58 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lal17g0385 Pkinase 2.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0385 - - cam:101503747 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0385 17 2585251 2586294 Lal17g0385 17 2585251 2586294 ECH
Lal17g0385 17 2585251 2586294 Lal21g0461 21 3272754 3274253 LSH