Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0384 ATGGTGTGCCAAGCAGCGAGTCAGACGAAATTTCGGGCATTGAAACACGAGAACGGATGCGCTGGAAGCTCCACCATTATAGTTAGAGTCCTCGCTTGCTTTCAAACTCTCAGAGAATGTCAGGCTGAATATTTCCGTCAATTGCTCAAGCCTGTCACGTGGTTGTTCTATTCAATGGGAGAAGATTGTGGAACCGGGATACCACATCTGCAACCTGGTTGGCAATCACCATATTTGACTACCTTTGGTATGGTAAAGCATAATGATGTTTCTGAAGCTATGAACCCTGCCATCAATCTGTTCTCAAGAAAAGAGGCAATGCCGAAGTATACATCCTCCGCACTACCTCATTTGCAGCTAGAACATTCTAATGAACCTCAAGGCTGGTTTTATTGTTTGCCTCGCATTCGCCAGGAATTTACTCCTGCTCCAAACTTCCCTGCCGAGGATAAGCTCCCTGCAGACCATGTGGAACATTTTAGGGATGATATTGCTAGTGCTCCCTGTGTTGAATCAGGCTCCCCTCAGAAGCAATTTCTTGTTATTGACCGGACAGCTGGTCAAACAACTGTTGTCTATAATTTTAGGTTTGGGAGTCACAATGAGTGCCTTGCTTCTTTGCATCGAAAACTGCACTGTGCTAACTATTTGAATGGGAATGAACCTTCATTTAGAACATATTTGAACCATATGACTGATCCAATTTTGGCTGATAAAGTTGATGAGAATCAGGGCACTGGCATTGACAATGAGATGCATGAAGACACAGATGAGATTAATGCATTGCTTTACTCGGACAGTGATGTTTATTCTGCCGAGGACGATGATGAAGTTATTAGCACAGGGCATTCTCCTAGTACAATGACCACTCATGATAACCATGAAGCTTTTAAGAAAACCACAGAAGAAGTTGCAAGCTTTGCTGGGAAAACCAAGAAGCGGAAGCTATCAGATGGTTACCATGATGACATACAACTCATGGATACTGCCAATTCTATGAATCAGAACAAATTATTTGCCATGGGAAATGATGCTGAATCAAGATGTTCTGGTGGCAAAGGTGAGGGACCAGATGTAATGGATTCCTTGCCAGGCAATAAGAAGATGAGAAAAGAGAAGATAAGAGATGTTCTGAGCATTCTGCAGAGTATGATTCCCGGTGGGAAGGAAAAGGACCCGGTCATGCTTCTTGGAGATGCCATACATTGCTTGAAATCCTTGAAACTCAAGGCTAAAGCGCTCGGACTGGATGCCTTGTAA 1260 0.4349 MVCQAASQTKFRALKHENGCAGSSTIIVRVLACFQTLRECQAEYFRQLLKPVTWLFYSMGEDCGTGIPHLQPGWQSPYLTTFGMVKHNDVSEAMNPAINLFSRKEAMPKYTSSALPHLQLEHSNEPQGWFYCLPRIRQEFTPAPNFPAEDKLPADHVEHFRDDIASAPCVESGSPQKQFLVIDRTAGQTTVVYNFRFGSHNECLASLHRKLHCANYLNGNEPSFRTYLNHMTDPILADKVDENQGTGIDNEMHEDTDEINALLYSDSDVYSAEDDDEVISTGHSPSTMTTHDNHEAFKKTTEEVASFAGKTKKRKLSDGYHDDIQLMDTANSMNQNKLFAMGNDAESRCSGGKGEGPDVMDSLPGNKKMRKEKIRDVLSILQSMIPGGKEKDPVMLLGDAIHCLKSLKLKAKALGLDAL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0384 419 PANTHER TRANSCRIPTION FACTOR BHLH145 59 417 IPR037546 -
Lal17g0384 419 MobiDBLite consensus disorder prediction 344 365 - -
Lal17g0384 419 PANTHER TRANSCRIPTION FACTOR BHLH145 59 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0384 Lal-Chr17 2579654 2582953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0384 59 412 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 27.224 2.59e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0384 - - gmx:102668102 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0384 17 2579654 2582953 Lal17g0384 17 2579654 2582953 ECH
Lal18g1168 18 14573210 14574307 Lal17g0384 17 2579654 2582953 PCT
Lal17g0384 17 2579654 2582953 Lal18g1168 18 14573210 14574307 PCT