Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0383 ATGGCACCCAGTTTTGACTGTGTTTCAAGCCTACTCTGTGCCGAAGACAGCAACAGCGTTTTTGATGAAGGTCATTCCGTGTACGAGGACACGTGGCAACATCGTAGGAACCTTCAAATTCATCGCTTTGGTGAATCATATGAGTTACCATTGCAGGATGATGAGTGTTTTGCGATGATGGTTGAAAAGGAACACCAACACTGGCCTGGTATTGTTTACTTGAATAGACTACACAGCGGGGATTTGGACTTTGGGGCAAGAAATGAAGCTGTTGATTGGATTGAAAAGGCCCGAGTACAACTTGGTTTTGGACCTCTTTGTGCATACCTATCCATAAACTACTTGGATCGCTTCCTCTCCACTTATCGATTACCGAGAGGAAGAGCTTGGACAATGCAATTGTTGGCTGTGGCGTGCTTATCTCTGGCTGCGAAAATGGACGAATCTGATGTTCCAATGAGTGTTGATTTGCAGGTGGGTGAAACCAAGTTTGTATTTGAAGCTAAAACCATTCAAAGAATGGAGCTTCTTATACTCAGCACATTGAGATGGAGAACGCAAGCAATTACTCCTTTTTCATTCATTGATCATTTCCTCTGCAAGATCAATAATGATCAAAGTCAAATAAGATCTTCAATTATGAAATCTATCCAACTCATATTGAGCACTGCAAGAGGTACCTGTCCGATCACCTCTCTTAATTGCATTGCACAAAATGACTACATATTTCGAGGAATTAGAGAAGGTATTGACTTCTTGGAATTCAAATCATCGGAGATCGCAGCAGCTGTGGCTATGTCCGTTGTGGGGGAAACCAAAACCATTGATATTAGGCAAACAATTGCTGTTTTGATTCAGCAGGCAGAAGAGGAGAGAGTCTTGAAGTGTGTTAAAATGGTCCAGGAGCTGTCACTAAACACTGGCATTGCCAAGTATCATTCAAGTGCTTCTGTACCTTGTGTGCCTCAAAGTCCAATAGGGGTGTTAGATGCTTTAAGCTTCAGCTACAAAAGTGATGACACAAATGCTGGTTCATGTGCAAATTCTTCACATAATGATAATAGCCCTGATGCTAAAAGAAGGAAGCTAAATAAAACCTGTGGATCAGAGCTATTGTAG 1119 0.4182 MAPSFDCVSSLLCAEDSNSVFDEGHSVYEDTWQHRRNLQIHRFGESYELPLQDDECFAMMVEKEHQHWPGIVYLNRLHSGDLDFGARNEAVDWIEKARVQLGFGPLCAYLSINYLDRFLSTYRLPRGRAWTMQLLAVACLSLAAKMDESDVPMSVDLQVGETKFVFEAKTIQRMELLILSTLRWRTQAITPFSFIDHFLCKINNDQSQIRSSIMKSIQLILSTARGTCPITSLNCIAQNDYIFRGIREGIDFLEFKSSEIAAAVAMSVVGETKTIDIRQTIAVLIQQAEEERVLKCVKMVQELSLNTGIAKYHSSASVPCVPQSPIGVLDALSFSYKSDDTNAGSCANSSHNDNSPDAKRRKLNKTCGSELL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0383 372 PANTHER CYCLINS 1 226 IPR039361 -
Lal17g0383 372 PANTHER CYCLINS 248 363 IPR039361 -
Lal17g0383 372 MobiDBLite consensus disorder prediction 342 372 - -
Lal17g0383 372 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 226 - -
Lal17g0383 372 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 248 363 - -
Lal17g0383 372 MobiDBLite consensus disorder prediction 354 372 - -
Lal17g0383 372 Gene3D - 59 298 - -
Lal17g0383 372 SUPERFAMILY Cyclin-like 50 185 IPR036915 -
Lal17g0383 372 SMART cyclin_7 92 180 IPR013763 -
Lal17g0383 372 CDD CYCLIN 87 179 IPR013763 -
Lal17g0383 372 Gene3D - 70 187 - -
Lal17g0383 372 Pfam Cyclin, N-terminal domain 56 185 IPR006671 -
Lal17g0383 372 ProSitePatterns Cyclins signature. 87 118 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0383 Lal-Chr17 2561451 2564188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0383 60 347 Core Cell Cycle Gene Families AT2G22490 44.407 3.94e-74 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0383 K18810 - gmx:547739 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0383 17 2561451 2564188 Lal17g0383 17 2561451 2564188 ECH
Lal17g0383 17 2561451 2564188 Lal4g0340 4 2270694 2273644 LSH