Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0382 ATGGGTTCACCAATCTCAGAAAACCTAAAGAAGGATCAATACGTTTACCTCGCAAAACTCGCTGAACAAGCCGAACGCTACGAAGAGATGGTTCACTTCATGCAGAAACTCGTAACCTCCTCCACTCCCTCATCGGAGCTCACGGTGGAGGAACGCAACCTCCTCTCCGTCGCTTACAAGAACGTCATCGGCTCCCTCCGTGCCGCGTGGCGCATCGTCTCATCTATCGAACTCAAAGAAGAGAGTCGCAAGAACGATGATCACGTTGCTCTTGTTAAGGATTATAGATCTAATGTTGAGAATGAATTAACTAATGTTTGTGGTACTATTCTTAATCTACTTGATGCTAATCTTATCCCTTCTGCTACTTCTACTGAGTCCGAAGTCTTTTACTTGAAGATGAAGGGTGATTATCATCGTTACTTGGCTGAGTTTAAGATTGGTGATGAGAAAAAATCTTCTTCTGAAGAAACCATGTTGTCTTATAAGGCTGCTCAGGTGTTGCTGAGTGACGAAATTCAAATCCTGAAAATACTCTCTCCATTTGACATTGCTCAAGCTGATCTTGCACCTACGCATCCTATTAGATTGGGTCTGGCACTGAATTACTCGGTGTTCTACTACGAAATTCTGAACCAGTCTGACAAGGCATGTGCGATGGCTAAACAGTTTTGTTCTGCTATAATCTGTGCACATTTGTTTGCTGCAATTGATAATGCTGCAATTGATAATGCTGCAATGGCTTTTGAGGAAGCAATTGCTGAGCTGGACACCTTGGGAGAAGAATCCTACAAAGACAGCACTCTTATAATGCAACTTTTGAGAGACAACCTCACTCTTTGGACTTCTGATGTCCAGGACCAACTAGATGAGCCTTGA 879 0.4323 MGSPISENLKKDQYVYLAKLAEQAERYEEMVHFMQKLVTSSTPSSELTVEERNLLSVAYKNVIGSLRAAWRIVSSIELKEESRKNDDHVALVKDYRSNVENELTNVCGTILNLLDANLIPSATSTESEVFYLKMKGDYHRYLAEFKIGDEKKSSSEETMLSYKAAQVLLSDEIQILKILSPFDIAQADLAPTHPIRLGLALNYSVFYYEILNQSDKACAMAKQFCSAIICAHLFAAIDNAAIDNAAMAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDVQDQLDEP 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0382 292 Pfam 14-3-3 protein 239 282 IPR023410 -
Lal17g0382 292 Pfam 14-3-3 protein 17 226 IPR023410 -
Lal17g0382 292 Coils Coil 17 37 - -
Lal17g0382 292 SUPERFAMILY 14-3-3 protein 240 287 IPR036815 -
Lal17g0382 292 PIRSF 14-3-3 233 291 IPR000308 -
Lal17g0382 292 PIRSF 14-3-3 6 233 IPR000308 -
Lal17g0382 292 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
Lal17g0382 292 Gene3D - 3 291 IPR036815 -
Lal17g0382 292 ProSitePatterns 14-3-3 proteins signature 2. 264 283 IPR023409 -
Lal17g0382 292 PANTHER 14-3-3 PROTEIN 8 226 IPR000308 -
Lal17g0382 292 PANTHER 14-3-3 PROTEIN 239 288 IPR000308 -
Lal17g0382 292 SMART 1433_4 11 291 IPR023410 -
Lal17g0382 292 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Lal17g0382 292 PRINTS 14-3-3 protein zeta signature 95 119 IPR000308 -
Lal17g0382 292 PRINTS 14-3-3 protein zeta signature 126 148 IPR000308 -
Lal17g0382 292 PANTHER BNAC02G00320D PROTEIN 239 288 - -
Lal17g0382 292 PANTHER BNAC02G00320D PROTEIN 8 226 - -
Lal17g0382 292 SUPERFAMILY 14-3-3 protein 10 226 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0382 Lal-Chr17 2544543 2547180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0382 5 286 14-3-3 family AT5G10450 70.213 9.53e-141 395
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0382 17 2544543 2547180 Lal17g0382 17 2544543 2547180 ECH