Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0366 ATGCCAAAGCCTGATAAGAAGCTCTATTTCTCTGAGGAAGATGCCGCTACTCTCATCCAAAGGAATGATGCAACGACGGTGTTAACGTTGCTCCAGGAAATAGCGCATTACCCTAATTCCAAGATTGATTGGAATGAGTTGGTCAAGAAATCCTCCACTGGTATTTCTAATGCCAGAGAATATCAGATGCTTTGGCGTCATTTGGCCTACCGTGATGCTTTGCTTGAAAACCCGGCCGCCACTGCCGAACCTTTGTTGAAGTCTTTCTTCCAGGATGATGATAGTGACCTAGAATGTGAACTGGAAGCATTACCACACACAAGTGCTGACTCTGTGTCGGAGGCTACAGCATGTGTGAAGGTGAATATTCTTGCCCTAATTAACCTATCTCGACAGACTAGGCCTTTGGGATTCATGCCTCTGCTAGTTACATCTTACTTATTTGATTACCATATGGTAATGATTGCTTCACACATGCCTAGTATCCCTAGTAGCTCCACGATCGAGGCTCCACTGACTCTAAATGTTCCTGTTAGCCATTCATCTAGAATTCGCAATGAATGTTCAGAGCCCTCCAATTTGATGCAGAGGATGAACATTATTTTTCCAGTTACTGTTCAGAGAACACCACTGCCAACTGTATCATCAACAGAAGGTATAGAAACAAGGGGATTAGGTGGTGGCAACCTGGCTTCAAAAAGGAAAAGATGGTCAGAGGAAGAGGACAATCAACTACGTGCTGCTGTTCAAAGATGGGGTGAAGGGAACTGGGAAACCATGGCAAAAAGAGACAGTTTTACTGTGAAGAGAACTCCTCCACAGTTGTCTCAGAGGTGGACCCATTTACGGAAGAAAGATGGCTGTACCACTATCAATGCTGGAACCAATTCAGTGCAAAATCGGCGCTCAACTGCTGAACAGCTGGCAATGAATAACGCAGTATCTTGTGCCCTTGACCCGCCATCAAATACACTTCTCAAAAAGTTTAATGCCCCCGCTAGTTTTAAGAAATCAATTAAAAGCCCTGCACAACCTACTGGTACTACTGAAGCTCCAAGAGTTCGCAATAACTTAGCACCAACTCAGAATCCATCTCAAAAAGTCGTGTTGGGATCTTGTGATTATCCTGCAAAGTCTAAATCAATCCTGGAAGAAACAATGGTGAAGTGTAAACCAACTCCAGAGTCTACGATAAAAGCTAACACGGTTGCTTCTGAGACACAGATTGTTTCTTCATTGAATACTGTGTCACAGTTTAAGGTTGCTCAAACAACTAGTTCTTTGGCAAAACCAACCATTCCTGTTGCTTTGCGTTCCAACTCAAAGTTACCTAATGTTCACACTGATTCAAGTGTTGCACCTGCACTTGTTCCCTCCAAATCTGCTGCCTTTGTCACATCTCTTGCTTCATGCAGTAATACTATAAAATCTGTCTCCTGTACATTGAAGAATTCACCTGTAGCTCTGTCTCGATTGTCTGAACAGGATAAACATGTTACTTCTGTGGTTAATAAAGTTCCACTTCAACTGAAGCAAGAAGCGATTATCACCGAATTTAAAGTTCCTGTTGCAAGTCCTACAACAAAAGTCAAGGTCCAAGCAGATGAGACTTCTACAATTACTACTAACAATCATCACATGCTAGTTAATAGCAACTTGAACAAGGGGAGACAAGATATGAATCAAGATAAGAACACTAAATTTGCCTTTCAATAA 1716 0.4225 MPKPDKKLYFSEEDAATLIQRNDATTVLTLLQEIAHYPNSKIDWNELVKKSSTGISNAREYQMLWRHLAYRDALLENPAATAEPLLKSFFQDDDSDLECELEALPHTSADSVSEATACVKVNILALINLSRQTRPLGFMPLLVTSYLFDYHMVMIASHMPSIPSSSTIEAPLTLNVPVSHSSRIRNECSEPSNLMQRMNIIFPVTVQRTPLPTVSSTEGIETRGLGGGNLASKRKRWSEEEDNQLRAAVQRWGEGNWETMAKRDSFTVKRTPPQLSQRWTHLRKKDGCTTINAGTNSVQNRRSTAEQLAMNNAVSCALDPPSNTLLKKFNAPASFKKSIKSPAQPTGTTEAPRVRNNLAPTQNPSQKVVLGSCDYPAKSKSILEETMVKCKPTPESTIKANTVASETQIVSSLNTVSQFKVAQTTSSLAKPTIPVALRSNSKLPNVHTDSSVAPALVPSKSAAFVTSLASCSNTIKSVSCTLKNSPVALSRLSEQDKHVTSVVNKVPLQLKQEAIITEFKVPVASPTTKVKVQADETSTITTNNHHMLVNSNLNKGRQDMNQDKNTKFAFQ 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0366 571 MobiDBLite consensus disorder prediction 337 365 - -
Lal17g0366 571 ProSiteProfiles Myb-like domain profile. 229 283 IPR001005 -
Lal17g0366 571 Pfam Myb-like DNA-binding domain 234 280 IPR001005 -
Lal17g0366 571 Gene3D - 230 288 - -
Lal17g0366 571 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 545 - -
Lal17g0366 571 MobiDBLite consensus disorder prediction 335 365 - -
Lal17g0366 571 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 233 287 IPR017930 -
Lal17g0366 571 SUPERFAMILY Homeodomain-like 233 285 IPR009057 -
Lal17g0366 571 SMART sant 233 285 IPR001005 -
Lal17g0366 571 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 545 - -
Lal17g0366 571 MobiDBLite consensus disorder prediction 213 238 - -
Lal17g0366 571 CDD SANT_TRF 235 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0366 Lal-Chr17 2440728 2446821 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal17g0366 Myb_DNA-binding 6.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0366 - - lang:109328668 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0366 17 2440728 2446821 Lal17g0366 17 2440728 2446821 ECH