Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0363 ATGAGAGAAGAGGAAGATGAGGGTTATGCAACCAAATCGCCCTTATCAGGTTTGCTTCTTGACCGTGAAAAATGTGCCATGCTGAGTTTACAAGACAAACAAAAACTAGTCCATGAGATTGCTCAACAGTCAAAAGATGCCCCAAATATGCTTCATTCCTTTACTCGCAGGGAGCTTCTAGAAATAATCTGTGCTGAATTAGGTGCAGAGAGAAAGTACACGGGATATACAAAGAGTCAAATGATAGAAAATCTTCTCAAGATAATTTATAAGAAATCCAAGTTTCACAGCATCCAAAAGACTGTTGCTCATGCCAAAAGTCACATTGGATCCAAGAGGAAAAAAGTTGCATCTAATGATTTACATTACGCGCCTCAAGGGAATAGTAAGGAGGAAACCGTGAAAACCCTACTGTGTCAAAATGTTGCATGCAGAGCAACGTTGACTCCAAAAGATTCCTTTTGCAAGAGATGTTCTTGTTGTATTTGTCTTTGTTATGATGATAACAAGGATCCTAGTTTGTGGTTGACCTGCAGCTCTGATCTTCCTGGTGAGGAGTCATGTGGAAGATCATGCCATTTGCAATGTGCTTTGAGTAATGAAATCTCTGGTATTTTGAAAGACATTTGGGGTACAAAGTTGGATGGAAGTTTTGTGTGTGCTTCTTGTGGAAAAACTAATGAATTGATGAGCACATGGCGCAAACAGTTGTTGGCTGCCAAAGAAGCCAGAAGAGTAGATATACTCTCTTTACGCGTATCTTTGGCTCACAGAATTCTCATAGGAACAGAAGTATACATTGAAGTTCAGAAGATTGTAGAAGCTGCTCTCAAGTTATTGAACAATGAAGTCGGACCACTGGATCAGGTATGTGCGCGAATGACACGTGGAATTGTGAGCAGGCTTTCATGTGGTTCTGACGTTCAGAAGTTATGCTCTAATGCACTTGACTGTTATTATTCGAAGTTTTATAATCTTCTCTCTGATGGTGCCAGAAATAAAGAAGCACCAGCATGCACTATAAGTTTTGAGGAGTGCCTTCCTACCTCCGTGGTCATTGTGCTAGACTATGAAGATCAACATTTAAATAAATTTTTAGGTTGCAGGCTTTGGCACCGAATATCAACAATGGACTACCCTGAACAACCCACTTTCATTGTTTTGAGGCCAGAGAAAAGGTTCAAGTTAGAAAACCTCCATCCTTCTACTGAGTACTTTTGCAAGGCTTCTCTGTTTAGCAGCACTGGGATTTTGAGTGCTGCAGAAGCTAAATGGGTTACACCTTCTAAACCCACAGGTTCTTCAAAAGTTACTACCCCTTCTCCTCATAAGCCCTCATTTACAACCATGCACATGTGTGCACATCACATGGATAAGATAGATGCTGAAAAACATTATCAAGTCGAATCTGCCAACTCCGACATGAAGTTATCCTCCACAAAACATCTGCTTTTGGATAACAGCAAGGGCAGATTTGAAGATTTCCTAACCAGTTCTCCATCTGTTGAATCTCTTTCATGTAAAAACTTTGCTGCGGTTTCGCCTACCACACCCTCTAAGTTCAATGAAATCAGACAAAGTAATGGTTTTACTTCCAGGAAGCGCGGGGAGGAAAATAATTACGAGTATTCTGTCAGGGTGGTCAAATGGTTAGAGCATGAAGGGCACATAGATGAAATCTTCAGAGTAAAGTTTCTCACTTGGTTCAGCCTTAAGGCTTCTCAGCAACAGAGAAGGGTTGTCAGTGCTTTCGCGGACGCATTAAATGACGACCCAGCAAGCTTAGCGGATCAGCTGATACACACTTTCACGGACGAGATATTTTGTGAGCAAAAATCCCAGTGA 1845 0.4119 MREEEDEGYATKSPLSGLLLDREKCAMLSLQDKQKLVHEIAQQSKDAPNMLHSFTRRELLEIICAELGAERKYTGYTKSQMIENLLKIIYKKSKFHSIQKTVAHAKSHIGSKRKKVASNDLHYAPQGNSKEETVKTLLCQNVACRATLTPKDSFCKRCSCCICLCYDDNKDPSLWLTCSSDLPGEESCGRSCHLQCALSNEISGILKDIWGTKLDGSFVCASCGKTNELMSTWRKQLLAAKEARRVDILSLRVSLAHRILIGTEVYIEVQKIVEAALKLLNNEVGPLDQVCARMTRGIVSRLSCGSDVQKLCSNALDCYYSKFYNLLSDGARNKEAPACTISFEECLPTSVVIVLDYEDQHLNKFLGCRLWHRISTMDYPEQPTFIVLRPEKRFKLENLHPSTEYFCKASLFSSTGILSAAEAKWVTPSKPTGSSKVTTPSPHKPSFTTMHMCAHHMDKIDAEKHYQVESANSDMKLSSTKHLLLDNSKGRFEDFLTSSPSVESLSCKNFAAVSPTTPSKFNEIRQSNGFTSRKRGEENNYEYSVRVVKWLEHEGHIDEIFRVKFLTWFSLKASQQQRRVVSAFADALNDDPASLADQLIHTFTDEIFCEQKSQ 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0363 614 PANTHER VIN3-LIKE PROTEIN 2-RELATED 11 613 IPR044514 GO:0010048|GO:0040029
Lal17g0363 614 PANTHER OS08G0220600 PROTEIN 11 613 - -
Lal17g0363 614 Pfam PHD - plant homeodomain finger protein 139 258 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0363 Lal-Chr17 2419105 2425321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0363 27 613 PHD Gene Family AT5G57380 33.713 5.05e-100 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0363 - - lang:109344253 1048.88