Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0346 ATGGGAAATCCAAATACCGAAACTGCCCCTCAGCCTAAACGACACCGTAAGACGAAACCTCAACCCTCTTCATCATCATCGGCCCCACCAGCAAGGGTCCCACTAAGGCAGTTACTTAAAGTTGCATCAGTAGCAGGTGGCATTCAGTTTGGGTGGGCCCTACAGCTTTCTCTTTTAACTCCCTACGTTCAACAGCTTGGGATCCCTCACGCTTGGGCCAGCATCATTTGGTTATGCGGCCCGCTCTCTGGGCTTTTTGTTCAGCCTTTGGTGGGCCTATTAAGCGACCGTTGCACCAGCCGATTTGGTCGCCGGAGGCCTTTCATTTTTGCCGGAGCTTTGTCTATCATCGTCTCCGTTCTCATAATTGGTCATGCTGCTGATATTGGGTGGTGGTTTGGGGATACGTTCAATCATCGGCCGTGGGCTGTGGCGGCGTTCGTCTTCGGTTTTTGGATTCTGGATGTAGCTAACAATGTCACTCAAGGTCCTTGTAGAGCTTTGCTCGGTGATCTCACAGGCAAGGATCACCGAAGGACACGTGTTGCAAATGCTTATTTCTCCCTGTTTATGGCCATTGGTAACATTCTTGGCTATGCAACTGGAGCATACAGTGGTTGGTACAAGGTCTTTCCTTTCACACTTACCCCTGCATGCAATATTAGTTGTGCAAATCTCAAGTCTGCTTTCTTTCTCGACATTGGTTTCATTGTGGTCACGACCTATATCAGCATCATGTCAGCTCATGAAGTGCCTATAAGTTCAAGTGGGGCTACCCATGTTGGAGAAGCTGCAGGGGAGTCAGGTAGCACGGAAGAAGCCTTCATGTGGGAGTTATTCGGGACATTCAAATATTTTTCGTCAGCTGTATGGACAATACTATCTGTTACTGCTTTAACATGGGTTGGGTGGTTTCCGTTTCTTCTCTTTGACACTGACTGGATGGGCCGAGAGATTTATGGCGGTGAGCCGAATGAAGGCCTTAATTATGATAATGGAGTTAGAATGGGGGCGGTTGGTTTATTGCTTAATTCAGTTGTTCTTGGAATAACATCATTGTTCATGGAGAGGCTATGCAGGAACCGGGGGCCTGGGTTTGTGTGGGGAATCTCAAATATCATAATGGCCATCTGCTTTGTTGCAATGCTTGTATTAACCTTTGTAGCAAGTAATGTTGGCTATTTAGGCAGAGATCTTCCACCAAATTTCGTTGTGATGGCAGCATTGTCAATCTTCACCATCCTTGGGTTTCCACTAGCGATCACTTACAGTGTTCCATATGCCTTAATTTCCACACATATTCAGTCATTGGGACTGGGCCAAGGATTATCAATGGGAGTTCTAAATCTTGCAATAGTAATCCCCCAGATGGTGGTGTCAGTGGGAAGTGGACCATGGGATCAGCTATTTGGTGGAGGAAACTCTCCAGCCTTTGCTGTAGGAGCTGTTGCAGGCCTTGTTGGTGGACTCATTGCTGTTATAGCTATTCCTCGACCTACTAGTCAAAAGCCTAGAAGCCAAGTTTGA 1527 0.4709 MGNPNTETAPQPKRHRKTKPQPSSSSSAPPARVPLRQLLKVASVAGGIQFGWALQLSLLTPYVQQLGIPHAWASIIWLCGPLSGLFVQPLVGLLSDRCTSRFGRRRPFIFAGALSIIVSVLIIGHAADIGWWFGDTFNHRPWAVAAFVFGFWILDVANNVTQGPCRALLGDLTGKDHRRTRVANAYFSLFMAIGNILGYATGAYSGWYKVFPFTLTPACNISCANLKSAFFLDIGFIVVTTYISIMSAHEVPISSSGATHVGEAAGESGSTEEAFMWELFGTFKYFSSAVWTILSVTALTWVGWFPFLLFDTDWMGREIYGGEPNEGLNYDNGVRMGAVGLLLNSVVLGITSLFMERLCRNRGPGFVWGISNIIMAICFVAMLVLTFVASNVGYLGRDLPPNFVVMAALSIFTILGFPLAITYSVPYALISTHIQSLGLGQGLSMGVLNLAIVIPQMVVSVGSGPWDQLFGGGNSPAFAVGAVAGLVGGLIAVIAIPRPTSQKPRSQV 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0346 508 CDD MFS_SLC45_SUC 38 492 - -
Lal17g0346 508 PANTHER SUGAR TRANSPORTER 16 506 - -
Lal17g0346 508 Gene3D MFS general substrate transporter like domains 35 496 IPR036259 -
Lal17g0346 508 MobiDBLite consensus disorder prediction 1 31 - -
Lal17g0346 508 TIGRFAM GPH_sucrose: sucrose/H+ symporter 33 501 IPR005989 GO:0005887|GO:0008515|GO:0015770
Lal17g0346 508 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 16 506 - -
Lal17g0346 508 SUPERFAMILY MFS general substrate transporter 38 500 IPR036259 -
Lal17g0346 508 Pfam MFS/sugar transport protein 53 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0346 Lal-Chr17 2234604 2240455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0346 8 504 Sucrose Transporter Gene Family AT1G09960 68.898 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0346 K15378 - gmx:100787939 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0346 17 2234604 2240455 Lal17g0346 17 2234604 2240455 ECH
Lal17g0346 17 2234604 2240455 Lal21g0436 21 3031311 3035496 LSH