Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0345 ATGGAACTTGACTATGACTTTGACTGTTACCACCCTATTCTTATATCTTACACCCTCACGACACTACAAATTAGTGAACTTGAAACATCTAAAACCAAAAAAACTGTCTCATCTGGTTTCGTGTTCTACTTTCCAATAATGTTCGCCGCCTTCACTATACCTCAACTCCTTCTTATCCTTCTCCCATTCTTCTCCATTCTTACCACCGTCAATTCTGACGACCGTAAAATCCTCCTCAACTTCAAATCCTCTCTTCATAAATCAAATTCCAAAGCCTTTGACTCATGGAACACCACTAACTCCGTTTGCACTTTCACCGGAATCACATGCAACTCCGTCAATTCCGTCACCGATATCAACCTCCCCAATCAAAACCTCTCCGGCGACCTCCCTGTACAATTTTTATGTAAACTTCATTCGTTACAAAAACTCGAACTTGGTTTCAACTCATTATATGGCAGAGTTACTGGAGATATTAGAAACTGTGTAAATTTGAAGTTTTTGGATTTGGGTAACAACGATTTTTCAGGACCCTTTCCTGATATATCACCTTTGAATCAATTGGAGTATTTGTTTCTGAATCAAAGTGGTTTCTCAGGAACTTTTCCATGGCAGAGTCTTGTTAACATGACGGGTTTGTTGCAGTTAAGCGTTGGAGATAACCCTTTTGATCTAACACCTTTTCCACAAGAGGTTTTGAGCTTGAAGAAACTGAATTGGCTTTATTTATCAAATTGTAACCTTGGAGGGAAAATACCAATTGAAATTGGTAATCTCACAGAACTCACAGAATTGGAGTTCTCTGACAATGTTCTCACAGGTGAGTTACCTGCTGGTATTGGGAACCTTCGGAAACTGTGGCAGCTTGCATTCTATAACAACTCCTTCACCGGGAAGCTTCCTATTGGTTTGAGAAATCTCACAAACATTGAGAATTTTGATGGGTCGATGAATAATCTTGAAGGGGATTTATCTGAACTGAGGTTCTTAAACAACCTTGTTTCCTTGCAACTATTTGAGAACGATTTCACGGGGGAGATTCCAATCGAATTCGGAGAGTTCAAAAAGTTGGTCAATATTTCTCTCTATAGAAACATGTTAACTGGTCCTATTCCAGAGAAAATTGGATCTTGGGCTGAGTTCAACTTCATTGATGTTTCAGAAAACTTATTGACTGGTCCTATTCCACCATATATGTGTAACAAAGGAACTATGCAAGCCTTGCTCGTGCTCCAGAACAGGCTTAGTGGTGAAATTCCATCTACCTATGGAAACTGTTTGACCCTGAAGCGGTTCAGAGTGAGCAACAACTCTCTTTCTGGTGTTGTCCCTGCTAAGATTTGGGGGTTGCCTAATGCAGAAATAATTGATATTGAGCTGAATCAGTTACAAGGTTCAGTTTCTTCAGACATAAACAAAGCCAAGACCTTAGCTCAGATATATGCCCAAAAAAATCGCTTATCTGGTGAAATACCTCAAGAGATTACTCAAGCTACTTCCTTGGTGACAATTGATCTCAGTGAGAATCAAATTTCAGGTAACATTCCAGAAGGAATTGGCAACCTTAAACAATTAGGTAGCCTTCATTTACAGAACAACAAGCTTTCTGGTTCAATACCAGATTCTTTAGGTTCCTGTAACTCCCTCAGCGATATTGATTTATCAAGGAATTCATTTTCACAACAAATCCCTTCATCATTAGGTTCATTACCTGCTTTAAATTCTCTCAATTTATCGCAGAATGAACTCTCTGGTGAAATTCCAGCGAGCTTAGCATTTCTCAGGCTAAGTTTGTTTGATCTTTCATATAACCAGTTAACTGGTCCGATACCACAGGCTCTAACAATCGAAGCTTACAACGGCAGCCTTGCAGGAAACACTGGTTTGTGCAGTGTCAATGCAATAGGCTCATTCTTAACTTGCTCTTCAAGTTCTGGCATGTCCAAAGGCGTTAGAACTCTCACTATTTGTTCCACAGTTGGTTTGATTTTGTTGCTTTGTCTCTTGGCTCTTTACTTGAATAAGAAGAAGGGCGATAAAGAGAGATTTGGAGGAGAACGTTCTTTGAAGGAAGAATCATGGGACTTGAAATCATTCCATGTGTTAAGTTTCACTGAGGATGAGATTCTAGATTCTATCAAGCAAGAGAATCTAATAGGCCAAGGAGGTTCAGGGAATGTGTATAGAGTTACACTCTCAAACGGGAAACACCTCGCGGTTAAGCACATATGGAACACTGATGTCAGCACAAGGAAGAGGTCATGGAGTAGCACTCCAATGCTCGCAAAGCGTGGTGGACGGAATAAATCGAAGGAGTTTGATGCAGAGGTGGAGGCTTTGAGTTCAATAAGGCACATGAATGTGGTGAAGCTTTATTGCAGCATCACAAGTGATGATTCAAGCTTGTTGGTGTATGAGTATATGCCTAATGGTAGCTTGTGGGATAGGCTTCACACGAGTAACAAGATGGAGCTTGATTGGGAGACAAGGTATGAGATCGCAGTTGGTGCAGCCAGAGGGTTGGAGTATCTGCATCATGGTTGTGAGAGGCCTGTGATTCATAGGGATGTCAAGTCCAGTAACATTTTGTTGGATGAGTTTTTGAAGCCAAGGATTGCTGATTTCGGGTTAGCTAAGATTGTTCAAGCCAACGTGGCCAAGGATTCCACACATATCATTGCTGGAACACACGGTTACATCGCTCCTGAATATGGTTACACATATAAAGTGAATGAGAAAAGTGATGTATATAGTTTTGGAGTGGTGTTAATGGAATTGGTAACTGGTAAAAGGCCAATAGAGGTAGAATTTGGAGAAAGCAAGGACATAGTCCACTGGGTTCATAGAAAGTCACAGAGCAAAGAGAGTTTTAGGAGTGCAGTGGACTCCAGAATCCCAGAGATGAATAAAGAGGAAGCTTGTAAGGTTTTAAGGGCATCAGTTCTTTGCACTGCTACTCTTCCAGCTTTGAGACCTTCCATAAGAGCTGTTGTTCAAATGCTTGAGGATGCTGACCCTTGCAAATTGGTTGGTATTCTCATTAGCAAAGATGGAAGTGGAAAGAAACTTGGAGTGAATGATGGTAAATCATGA 3093 0.4067 MELDYDFDCYHPILISYTLTTLQISELETSKTKKTVSSGFVFYFPIMFAAFTIPQLLLILLPFFSILTTVNSDDRKILLNFKSSLHKSNSKAFDSWNTTNSVCTFTGITCNSVNSVTDINLPNQNLSGDLPVQFLCKLHSLQKLELGFNSLYGRVTGDIRNCVNLKFLDLGNNDFSGPFPDISPLNQLEYLFLNQSGFSGTFPWQSLVNMTGLLQLSVGDNPFDLTPFPQEVLSLKKLNWLYLSNCNLGGKIPIEIGNLTELTELEFSDNVLTGELPAGIGNLRKLWQLAFYNNSFTGKLPIGLRNLTNIENFDGSMNNLEGDLSELRFLNNLVSLQLFENDFTGEIPIEFGEFKKLVNISLYRNMLTGPIPEKIGSWAEFNFIDVSENLLTGPIPPYMCNKGTMQALLVLQNRLSGEIPSTYGNCLTLKRFRVSNNSLSGVVPAKIWGLPNAEIIDIELNQLQGSVSSDINKAKTLAQIYAQKNRLSGEIPQEITQATSLVTIDLSENQISGNIPEGIGNLKQLGSLHLQNNKLSGSIPDSLGSCNSLSDIDLSRNSFSQQIPSSLGSLPALNSLNLSQNELSGEIPASLAFLRLSLFDLSYNQLTGPIPQALTIEAYNGSLAGNTGLCSVNAIGSFLTCSSSSGMSKGVRTLTICSTVGLILLLCLLALYLNKKKGDKERFGGERSLKEESWDLKSFHVLSFTEDEILDSIKQENLIGQGGSGNVYRVTLSNGKHLAVKHIWNTDVSTRKRSWSSTPMLAKRGGRNKSKEFDAEVEALSSIRHMNVVKLYCSITSDDSSLLVYEYMPNGSLWDRLHTSNKMELDWETRYEIAVGAARGLEYLHHGCERPVIHRDVKSSNILLDEFLKPRIADFGLAKIVQANVAKDSTHIIAGTHGYIAPEYGYTYKVNEKSDVYSFGVVLMELVTGKRPIEVEFGESKDIVHWVHRKSQSKESFRSAVDSRIPEMNKEEACKVLRASVLCTATLPALRPSIRAVVQMLEDADPCKLVGILISKDGSGKKLGVNDGKS 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0345 1030 ProSiteProfiles Protein kinase domain profile. 713 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0345 1030 ProSitePatterns Protein kinases ATP-binding region signature. 719 741 IPR017441 GO:0005524
Lal17g0345 1030 Gene3D Phosphorylase Kinase; domain 1 697 807 - -
Lal17g0345 1030 Pfam Protein kinase domain 715 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0345 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 852 864 IPR008271 GO:0004672|GO:0006468
Lal17g0345 1030 Gene3D Ribonuclease Inhibitor 73 182 IPR032675 -
Lal17g0345 1030 PANTHER UNNAMED PRODUCT 58 1022 - -
Lal17g0345 1030 SUPERFAMILY Protein kinase-like (PK-like) 705 1002 IPR011009 -
Lal17g0345 1030 Pfam Leucine rich repeat 500 558 IPR001611 GO:0005515
Lal17g0345 1030 Gene3D Ribonuclease Inhibitor 406 646 IPR032675 -
Lal17g0345 1030 Gene3D Transferase(Phosphotransferase) domain 1 808 1009 - -
Lal17g0345 1030 Gene3D Ribonuclease Inhibitor 183 405 IPR032675 -
Lal17g0345 1030 SMART serkin_6 713 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0345 1030 CDD STKc_IRAK 719 1002 - -
Lal17g0345 1030 SUPERFAMILY L domain-like 79 397 - -
Lal17g0345 1030 Pfam Leucine rich repeat N-terminal domain 72 111 IPR013210 -
Lal17g0345 1030 SUPERFAMILY L domain-like 328 645 - -
Lal17g0345 1030 PANTHER RECEPTOR-LIKE PROTEIN KINASE HAIKU2 58 1022 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0345 Lal-Chr17 2221347 2225398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0345 64 1021 Receptor kinase-like Gene Family AT1G09970 60.748 0.0 1144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal17g0345 Pkinase 2.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0345 - - gmx:100809356 1520.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0345 17 2221347 2225398 Lal17g0345 17 2221347 2225398 ECH
Lal17g0345 17 2221347 2225398 Lal4g0308 4 1996424 2000515 LSH