Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0313 ATGGTTATGGTGATGGCATTAATGTTATCCCTATCTTGCTCCAGTTTCCAATCTCTCCACATTTCTTGTTACAATCCAATTCCATCACGTAGACTCACTCTCTTTCAACTTGTCACTGCCACTATAGGTATTCCACAGACACAATCTCAGTTTTTTGGAGCAAAAGGGTCTGAGTTTTTTCAAGTATCTGAGACAAATGTTGCATCAGTAAAAGACCAAAATTTATTTAATTGGGTCCAAAATGACAATAGAAGATTTCTCCATGTGGTTTACCATGTTGGGGACTTGGACAAAACTATAAAGTTCTACACTGAATGTCTTGGCATGAAGCTGTTGAGAAAGCGTGATATACCAGAAGAGAAATATTCAAATGCTTTTCTTGGATACGGGCCAGAAGATTCTAATTTCACAGCTGAACTTACTTACAGTTATGGAGTTGATCACTATGACATTGGAACTGGTTTTGGTCATTTTGGTGTTGTAGTTAAAGATGTTGCTAAGACTGTGGATCTAATAAAGATGAAAAGAGGAAAAATTACCAAGGAACCAGGGTCTGTCAAAGGTAGCAGCAATACAATAATTGCTTTGGCTGAAGATCCTGATGGCTATGAGTTTGAGCTTTTGGAGAGAGGGCCTACCCCTGAACCCCTATGCCAAGTGATGCTCCAAGTAGGTGATCTTGATCGTGCCATAGCCTTCTATGAAAAAGCTCTTGGCATGCACCTTCTCCACAAGAGGGACAATCCCGAGTACAAGTATACAGCAGCCACGATGGGCTATGGTCCCGAAGATAAGAATACAGTTCTAAAACTGAAATATAATTATGGTGTCAAAAATTATGACAAAGGAAATGGTTATGTACAGATTGCAATAGGCACAAATGATGTCTATAAAACTGCAGAAGCAATAAAACTGTGTGGAGGAAAGGTTATCCGTGAACCTGGTCCCTTGCCAGGTATCAACACCAAGATAACAGTTTGCCTTGACCCTGATGGTTGGAAATGGGCATTTGTTGATAATGTTGATTTTCTGAAGGAATTAGAGTGA 1047 0.3964 MVMVMALMLSLSCSSFQSLHISCYNPIPSRRLTLFQLVTATIGIPQTQSQFFGAKGSEFFQVSETNVASVKDQNLFNWVQNDNRRFLHVVYHVGDLDKTIKFYTECLGMKLLRKRDIPEEKYSNAFLGYGPEDSNFTAELTYSYGVDHYDIGTGFGHFGVVVKDVAKTVDLIKMKRGKITKEPGSVKGSSNTIIALAEDPDGYEFELLERGPTPEPLCQVMLQVGDLDRAIAFYEKALGMHLLHKRDNPEYKYTAATMGYGPEDKNTVLKLKYNYGVKNYDKGNGYVQIAIGTNDVYKTAEAIKLCGGKVIREPGPLPGINTKITVCLDPDGWKWAFVDNVDFLKELE 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0313 348 ProSitePatterns Glyoxalase I signature 1. 219 240 IPR018146 GO:0004462|GO:0046872
Lal17g0313 348 PANTHER LACTOYLGLUTATHIONE LYASE, CHLOROPLASTIC-RELATED 23 348 - -
Lal17g0313 348 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 217 340 IPR029068 -
Lal17g0313 348 Gene3D - 213 348 IPR029068 -
Lal17g0313 348 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 86 207 IPR004360 -
Lal17g0313 348 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 219 337 IPR004360 -
Lal17g0313 348 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 84 216 IPR029068 -
Lal17g0313 348 TIGRFAM glyox_I: lactoylglutathione lyase 217 341 IPR004361 GO:0004462|GO:0046872
Lal17g0313 348 TIGRFAM glyox_I: lactoylglutathione lyase 74 219 IPR004361 GO:0004462|GO:0046872
Lal17g0313 348 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 216 340 IPR037523 -
Lal17g0313 348 Gene3D - 57 211 IPR029068 -
Lal17g0313 348 ProSitePatterns Glyoxalase I signature 1. 88 109 IPR018146 GO:0004462|GO:0046872
Lal17g0313 348 PANTHER LACTOYLGLUTATHIONE LYASE 23 348 - -
Lal17g0313 348 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 85 210 IPR037523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0313 Lal-Chr17 1963891 1969988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0313 219 333 Calmodulin-binding Proteins AT1G08110 25.714 5.87e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0313 K01759 - tcc:18587961 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0313 17 1963891 1969988 Lal17g0313 17 1963891 1969988 ECH