Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0306 ATGGAGAAGAGTGAACCGGCTTTCGATTCAGCTCCTGGTAGATCGGTTAGGCAATTGGATTTCACGGCTGCGAATGGTGGTACGGCACACCTGAAACTGCCGCAGTGGCCGTCACAGTCGATTATGAAGCTGCCGTGTCAGTCGCCGCCGACGCAAGTGAAACCGCCGTGGTTATATCAGCAGATAGCTTCACAGTCTCAGGTAATGCCGCAATCGCAAGCAGCGCAACCGCGGCAGCTGGTTTCGCCGGTACGGCCGATTCCGCATCCTGTGCATAAACTTCCGGTGAATATGTTGCAAGTCTCGAAGCAAGAGTCTCCTGAATCACGGCCTCGACAAAATTTGGGCTTAAAAGAGAGCACTCCAAAGAAACAAAAACAATGCAATTGTAAAAATTCCCGGTGCCTCAAATTGTACTGTGAGTGCTTTGCATCTGGGATTTATTGTGATGGCTGCAATTGTGTAAATTGTCATAATGATGTGGATAATGAGGCTGCCAGACAGGAGGCAGTGGGGATAATATTGGAACGCAATCCAAATGCTTTCAAACCAAAAATTGCTAGCAGTCCTCAAGGATCACGAGAGTCCAAGGAAGATGTGTCTGAAATTCAAGTAGTAGGAAAGCACAATAAAGGATGTCACTGCAAGAAATCAGGTTGCCTTAAGAAGTATTGTGAGTGCTTCCAAAACAATATTCTCTGCTCTGAAAATTGTAAATGCATGGACTGCAAGAATCTTGAATTAAGTGACCAACAAAGATCAGTTTTTAATGAAGAGCACAATCTAGTTCCCACCAAACAGGCAGCTAATGCTGTCATCAGTGGAACAGTTGGATCCTCTGGCTATGGAACACACACAACAGCCAAGAAGAGGAAAGCACAGAAAATATTGTGCGGCAATTCAGCCACAGATCAAACTGTTAACCAGACTGCTCAATATCAACAGGAAATTGATCCTATATCTTCATCACCTTCACCCCTGTCATCTTCCTTTGTATCTGACACTGCCAACACAAGAATTTCAGGATCTTTAAGATCTACATACCGGTCCCTATTGGCGGATGTCCTCCAGACAGAGAATGTGAAGAATCTGTGTTCACTTTTTGTCGTGCTCTCAGGAGTTGCTGTAACGAAAAATGCAGTTAGGAGAGGCAAAGTAGACCGGCAAATACAAACTGGAAAATTTGATCCCTCTTTTGCTTCATCGCAATCACTGCAAAACACGAGAGATGACCAAAAGCCTGTCCGTGATGATCGTGTGAATAAAGACGAAGCAGAAACATATGGAACTGGTATTGGTAATTATAATAGGCCATTGTCACCTGAAACACTCGCATTGATGTGTGATGAACAGGATGAGATGTTTCTCGGTAATAGTTTGGAAAATAGAGTGGCCAGCAACATCAATTGTGAGAACATGATTCAAAAGTTATCTAATTCTGATGGATGCACTGATGATTATGGAGAGCAAGAAAGGCTTGTTCTGACCAAATTCCGGGATGTTCTTCGCGAACTCATTACTCTTGGGAACCTAAAAGAAACAATGTTCACTTCATTAGCCAAGAAAGATATGGGAAGCAAGAAAGAACCTGCAGAATATGTTAATAGTAGTGCTGAAACTAATATAGGGATGGAAAAGGAAATTCAGAGCAACTGCATTGCAACTTGCATCATCCCAGCCTCTATTGAAACATCTCAGACGAATTATGCAATAACTAATGATCATGTTAATACTGATCTTTCATTAAAGGTTGCCTGCACATTGAAATAA 1770 0.4282 MEKSEPAFDSAPGRSVRQLDFTAANGGTAHLKLPQWPSQSIMKLPCQSPPTQVKPPWLYQQIASQSQVMPQSQAAQPRQLVSPVRPIPHPVHKLPVNMLQVSKQESPESRPRQNLGLKESTPKKQKQCNCKNSRCLKLYCECFASGIYCDGCNCVNCHNDVDNEAARQEAVGIILERNPNAFKPKIASSPQGSRESKEDVSEIQVVGKHNKGCHCKKSGCLKKYCECFQNNILCSENCKCMDCKNLELSDQQRSVFNEEHNLVPTKQAANAVISGTVGSSGYGTHTTAKKRKAQKILCGNSATDQTVNQTAQYQQEIDPISSSPSPLSSSFVSDTANTRISGSLRSTYRSLLADVLQTENVKNLCSLFVVLSGVAVTKNAVRRGKVDRQIQTGKFDPSFASSQSLQNTRDDQKPVRDDRVNKDEAETYGTGIGNYNRPLSPETLALMCDEQDEMFLGNSLENRVASNINCENMIQKLSNSDGCTDDYGEQERLVLTKFRDVLRELITLGNLKETMFTSLAKKDMGSKKEPAEYVNSSAETNIGMEKEIQSNCIATCIIPASIETSQTNYAITNDHVNTDLSLKVACTLK 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0306 589 MobiDBLite consensus disorder prediction 392 434 - -
Lal17g0306 589 MobiDBLite consensus disorder prediction 394 409 - -
Lal17g0306 589 MobiDBLite consensus disorder prediction 410 425 - -
Lal17g0306 589 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 1 565 - -
Lal17g0306 589 SMART CXC_2 208 249 IPR033467 -
Lal17g0306 589 SMART CXC_2 123 163 IPR033467 -
Lal17g0306 589 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 211 245 IPR005172 -
Lal17g0306 589 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 125 160 IPR005172 -
Lal17g0306 589 PANTHER TESMIN/TSO1-RELATED 1 565 IPR028307 -
Lal17g0306 589 ProSiteProfiles CRC domain profile. 124 248 IPR005172 -
Lal17g0306 589 MobiDBLite consensus disorder prediction 68 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0306 Lal-Chr17 1913252 1918071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0306 14 521 CPP Transcription Factor Family AT4G29000 43.985 6.06e-127 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lal17g0306 TCR 3.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0306 - K21776 gmx:100811459 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0306 17 1913252 1918071 Lal17g0306 17 1913252 1918071 ECH