Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0284 ATGGATCCTTCAAAGAAATCTAACAAGATCAAACAAATTGTTAGACTTCAGCAGATCCTTAAGAATTGGAGGAAGAAAGCCAACTCTGCAAAAACAAGCACAAGTAACAACGACAACAACAACAGTAATAAAAGAAGCAACATTCTGAAAAGAACACTTTCTTTGTCAGAAAGTGATGGAGGATCATGCAACATGGTTCCAAAAGGGTACCTTGCAGTTTGTGTTGGCATAGAGCTTAAGAGGTTTGTTATCCCAACAGAATATTTGGGTCATCAAGCCTTTCACAAATTGCTCAGAGAAGCTGAAGAAGAATTTGGATTTGAACAAACTGGTGTTCTTAGAATTCCTTGTGAAGTATCTGTGTTTGAGACTATCTTGAAGATAGTATCTACTCAGAAATGTAGATTTAATGTTGAAAAAATAATAGGGTACTGCTCCTCAAACCAGCTTGCATATTCTCACCAACCTCAAAGTCCAATGTGCAGATAG 489 0.3701 MDPSKKSNKIKQIVRLQQILKNWRKKANSAKTSTSNNDNNNSNKRSNILKRTLSLSESDGGSCNMVPKGYLAVCVGIELKRFVIPTEYLGHQAFHKLLREAEEEFGFEQTGVLRIPCEVSVFETILKIVSTQKCRFNVEKIIGYCSSNQLAYSHQPQSPMCR 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0284 162 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 162 IPR003676 GO:0009733
Lal17g0284 162 MobiDBLite consensus disorder prediction 27 46 - -
Lal17g0284 162 Pfam Auxin responsive protein 21 128 IPR003676 GO:0009733
Lal17g0284 162 PANTHER OSJNBA0060N03.10 PROTEIN 6 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0284 Lal-Chr17 1768413 1768901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0284 4 162 Calmodulin-binding Proteins AT4G31320 50.521 3.91e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0284 K14488 - aprc:113865930 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0284 17 1768413 1768901 Lal17g0284 17 1768413 1768901 ECH