Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0241 ATGACAAAGAAGAAAAATCCCCTAGTGTTTATGGATGTGTCCATTGATGGGGATCCTTTTGAAAGGATGGTGTTTGAGCTTTTGTACGATGTTGCTCCCAAGACTGCAGAAAAATTTCTTGCATTATGTACAGGAGAAAAAGGAATCAGTCCAAATACTGGAAAATCACTGCACTACAAGGGATCTTTCTTCCATCGCATTGTAAAAGTGGTCCCTGTTACCGTTGTTTATGCTGTAGGATACAGGGATGATGGTCACGACTCCTTTTCTTGTGATCTAGTTTTAAGGCTGGTGATTTTGCCAATCAAAATGTTGTCCGAGTTGCAAGCCTTGTTCCATTTGCATGTTTCCTATGACAGTGAGACTAGTGGAGAAAGCATATATGGCTCAGATTTCTCAGATGAGTCTTCTATGCTAAAGCATGATGCTCCAGGCCTTCTATCCATGGCAATTTCTGACCGTGATACTCTTAGTTCGCATTTTATTATCACTTTGAAAGCTGATCGTCATCTTGATAGGAAGCATGCGGTCTTTGGGAAGCTTGTGCTAGGGCATAATATTTTGAAGAAAATTGAAGACGTGGGTGACGAAGAAGGGCGTCCAACTGTAACTGTTAAAATTGTTAATTGTGGTGAATATGCTGAGGCACGACATAAGGGAAAGCACAAAAAGTCTTCTAAAGACAGAAGGAAAAGGAGAAGAAGATACTACTTATCTGAATCAGAGAGTTCTTCAGATTCAGACATGGAGTCTTCAGAAACTGATAGTGATTCTGAGTCAGATGTTTCATCATCGTCTGACATAAGTTCTTCAAGTGATGACAGGCGAAGGAAGAGAAAGAGATCTAGAAAAGATAAACATAGACATCGAAAAATAAGGAATAAACGCCGCGACAAGAGGCAAAGGAGACGAGATAAGAGATCAAAGCGTAGATCAAGAAGGGAACCAGGCAGTGATTCAGATGATGAGAAAAACCGGGACGTTAGCTTTGATGGTGCAAGTCTTGATGATCAAGGGAAAGAGCAGAACCATAAAGATCAAGGGAAAGAGCAGAACCATAAAGATCATTCTCAGAAAAATGGAGCTAAAGTTCGGTCTCCCTTAGTTGTGGTGAGAGACAGTCATAACAAGGACAGGCCAGTGGATGTGCCAGAGACTGAGGAAGAACTTCCAAAGGAAAATGGAAAACGGCTTACTAACGGCATTGGATCTGACTATAGATTTGACCAACGTGAAGAGAGGCAGCCTGACGTGATGGATTATCATTCAGGAAAATCTAGGAGTCGAAGCATGAGTCCTAAGCGACCCATGAGTAATAGTTTGAGTATCAGTGCCCGGAGGAGTCAGAGCAAGAGCCCAAGTGTAACTCCAAAAAAGAGATTTAGCAGAGGTCCAGCTGGTAGCAGAAGCCCCCCAGCAAGAAGGAGTGTGAGCAGAAGTCCTGTTAGAAGCATCAGCAGAATTCCAAGCAAAAGCATCAGTAGAAGCCCAGTAAGGGGCAAGAAGGGAAGTAGTTTGAGTAGAAGCCCAGCAAGGGGTGGAAAGGGGAGAAGTGTCAGTAGAAGCCCAGTGAGGGGTGTGAAGGATAGAAGTGTCAGTAGAAGTCCTGTGAGGAGTAGGAAGGGGAGAAGTATTAGTAGAAGCCCCGTGAGAAGTCGCTCTTTAAGAAGTGTCAGCAAGAGCCCTGTAAGGTTCTCATCTCGAAGCCGCAGGAGTTCTCCCAGAGCATCATCACGAAAAACAATCAGCAGAAGTCCAGTTAGAGTATCAAGAAAGGGTGTTAGCAGGAGTCCAGTTAGATCACCTTCAAGAAGCTTAAGCAGAAGCTCTGGCAGGGTCTCTTTGAGGAGAGACATTAGCCGGAGTCCTGTCAGAGCACCAAGCAGGAGCAATCGCCGAAGTTACTCTAGGAGTCCTAGTCCTGTTCGTAGGACAAGAACACCTCGTGGGAGGAGTGTGTCGAGAAGTGTTTCACCGGCTGCGTCACCAAGGCGTGTCAGAAGGGGAAGAGTTTTTAGTGAACGATACTCTTATGCACGAAGGTATAATACTCCCTCGTGGTCTCCTGTGAGGTCATACCGCTACAATGGAAGAGATCGTGACAGATATTCTAGTTACAGAAGGTATTCTCCTAGGCGTTACAGGAGCCCACCACCACGTGCAAGAACTCCTCCAAGGTTTTTTCCCACTCGCTGTACCGAAGCAGGAGGACACCATCTGTTTCCCCCAGCCCACGTTACCATGCTCGACGCTATAGCCGAAGCCGTAGCCCGGTCAGCAGTCGCTCTCCAATTGAGCCACATCTTAATCGCCCCTCTTCTCGTGTGGGGAGGCGATTATCATCTTCTCGGAGCAAGAGTCCATCAAAGTCCAGATCTTCGATATCACAATCTCCACGAAAAGCAAGCAGAGAAAAGAGGTCAGGGTCATCCTCCTCCAGAAGCCCAGATGGAAAGAAAGGTCTGGTCTCTTATGGAGATGGTTCTCCCTACTCAGGGTAAAGGTGAAATATGTGGCCTGAGGGAGGGTCTTGGGATACTATCCTTTTATGAGTTGGAGTCTTCATTTCTTGAACTCATGCTTTACTTGTTTGCTATAAATTCTCGGTGA 2610 0.4556 MTKKKNPLVFMDVSIDGDPFERMVFELLYDVAPKTAEKFLALCTGEKGISPNTGKSLHYKGSFFHRIVKVVPVTVVYAVGYRDDGHDSFSCDLVLRLVILPIKMLSELQALFHLHVSYDSETSGESIYGSDFSDESSMLKHDAPGLLSMAISDRDTLSSHFIITLKADRHLDRKHAVFGKLVLGHNILKKIEDVGDEEGRPTVTVKIVNCGEYAEARHKGKHKKSSKDRRKRRRRYYLSESESSSDSDMESSETDSDSESDVSSSSDISSSSDDRRRKRKRSRKDKHRHRKIRNKRRDKRQRRRDKRSKRRSRREPGSDSDDEKNRDVSFDGASLDDQGKEQNHKDQGKEQNHKDHSQKNGAKVRSPLVVVRDSHNKDRPVDVPETEEELPKENGKRLTNGIGSDYRFDQREERQPDVMDYHSGKSRSRSMSPKRPMSNSLSISARRSQSKSPSVTPKKRFSRGPAGSRSPPARRSVSRSPVRSISRIPSKSISRSPVRGKKGSSLSRSPARGGKGRSVSRSPVRGVKDRSVSRSPVRSRKGRSISRSPVRSRSLRSVSKSPVRFSSRSRRSSPRASSRKTISRSPVRVSRKGVSRSPVRSPSRSLSRSSGRVSLRRDISRSPVRAPSRSNRRSYSRSPSPVRRTRTPRGRSVSRSVSPAASPRRVRRGRVFSERYSYARRYNTPSWSPVRSYRYNGRDRDRYSSYRRYSPRRYRSPPPRARTPPRFFPTRCTEAGGHHLFPPAHVTMLDAIAEAVARSAVALQLSHILIAPLLVWGGDYHLLGARVHQSPDLRYHNLHEKQAEKRGQGHPPPEAQMERKVWSLMEMVLPTQGKGEICGLREGLGILSFYELESSFLELMLYLFAINSR 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0241 869 MobiDBLite consensus disorder prediction 276 311 - -
Lal17g0241 869 MobiDBLite consensus disorder prediction 473 503 - -
Lal17g0241 869 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP95 1 217 - -
Lal17g0241 869 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP95 214 432 - -
Lal17g0241 869 MobiDBLite consensus disorder prediction 216 667 - -
Lal17g0241 869 SUPERFAMILY Cyclophilin-like 5 212 IPR029000 -
Lal17g0241 869 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 211 IPR002130 GO:0000413|GO:0003755
Lal17g0241 869 MobiDBLite consensus disorder prediction 312 361 - -
Lal17g0241 869 MobiDBLite consensus disorder prediction 522 536 - -
Lal17g0241 869 MobiDBLite consensus disorder prediction 704 725 - -
Lal17g0241 869 MobiDBLite consensus disorder prediction 548 613 - -
Lal17g0241 869 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Lal17g0241 869 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 145 160 IPR002130 GO:0000413|GO:0003755
Lal17g0241 869 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 160 172 IPR002130 GO:0000413|GO:0003755
Lal17g0241 869 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 188 IPR002130 GO:0000413|GO:0003755
Lal17g0241 869 MobiDBLite consensus disorder prediction 220 234 - -
Lal17g0241 869 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 212 IPR002130 GO:0000413|GO:0003755
Lal17g0241 869 MobiDBLite consensus disorder prediction 430 457 - -
Lal17g0241 869 MobiDBLite consensus disorder prediction 624 659 - -
Lal17g0241 869 Gene3D - 1 213 IPR029000 -
Lal17g0241 869 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 217 - -
Lal17g0241 869 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 214 432 - -
Lal17g0241 869 MobiDBLite consensus disorder prediction 406 424 - -
Lal17g0241 869 MobiDBLite consensus disorder prediction 370 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0241 Lal-Chr17 1492042 1498558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0241 25 208 U-box Gene Family AT5G67530 30.108 7.56e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0241 K09566 - qsu:112027169 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0241 17 1492042 1498558 Lal17g0241 17 1492042 1498558 ECH