Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0226 ATGGCTTCCAGTGCCAATTCCAAAATACCCACAATATTGGATTACGGGAGAGAAAGTAGGCCGGAATTGCGTCGGCAGATTTTATGGAGAAAGAGAAGAGCAAATATAATCGTACTTGCTCTTGGTGCAAGTTACAATGAGGAGGGGGGGAGTCAGGAGCAGATTCTCCTCCATAAAGACCGGGTCAATGGGAAAACCGCAAAGGAGGATAACGGGAACTTATCAATACTATATGGCTTGTTCACTGGCTCAAGATTCGTGGGGGTTTGGGTGCACTATTGTGGAAATGTTGACTGGTGTGGGCATCCTGTTAGTGAAATGTATCAATGTGTTGTTGAAAAGCATGAAAAACCCCATTTTCCTAGCGGTCTTCCTTCTTCAATTGAGAATATCCTCAGTGGATGCTTGGAATATGATTTAAGAAATCGTCCTTTAATGGTGGATATTCTTACCGTCTTTAAAAGCGCACTGAATGCACTAGGCGATGATGGAGGATGGAGATATATTGGAACTAATACAGTTAATGTAAAATCAAGTAGCACTGGCTATACAAGGTGGTTCCTCTCAAAGGATCATCTTAAGGTGGGTGACATGGTGCGATCTAGGAAGCCTTCCAATTCATGCAGACCTCAAAACATGGATGTCCCAGAAGGAATTGTTGTTGGATTAGATCGTAATGCAGATTGTGGTTTCATTTTAGTGAGGGTCCATGGTGTCCATGACCCTATAAGGATTCATGCATCAACTCTTGAACGTGTCACCAATGGTTTGGCAGCCAGTGATTGGGTATACTTGAAGGAAGAAAATGAGAATCACTCACCAGTTGGTATTCTTCATTCCATCAATCGTGACGGAAGAGTGACCGTTGGATTTATTGGGCTGCAAACTTTTTGGAAAGGAAATGCTTCAGAACTTGAAATGGCAGAATCTTACTGTGTTGGCCAGTTTGTTAAGCTGAAAGCCAATGTTTTGAGTCCTCGATTTGATTGGCCTCGTAAAAGAGGCGGGGCCTCGGCTGCTGGTAAAATTTCATGGATCCTACCAAATGGGTGTCTAGTTGTCAAGTTTCCAGGGTTGTTGACTTTCAGGGACGAGGCAAACATCTTCTTGGCCGATCCCTCTGAGGTTTATGCAGTTAGTTTTAGGACTTGTCCGATGATGATAGAGAAGTATCAACAGGTGGAGGATCATCACTGGACAGTTAGACCTGTTCTAATTGCATTTGGCCTTCTTACAGCTATGAAACTTGGGATTCTAATTGGAAGGAAAATAGGAAGAAAATGA 1284 0.4299 MASSANSKIPTILDYGRESRPELRRQILWRKRRANIIVLALGASYNEEGGSQEQILLHKDRVNGKTAKEDNGNLSILYGLFTGSRFVGVWVHYCGNVDWCGHPVSEMYQCVVEKHEKPHFPSGLPSSIENILSGCLEYDLRNRPLMVDILTVFKSALNALGDDGGWRYIGTNTVNVKSSSTGYTRWFLSKDHLKVGDMVRSRKPSNSCRPQNMDVPEGIVVGLDRNADCGFILVRVHGVHDPIRIHASTLERVTNGLAASDWVYLKEENENHSPVGILHSINRDGRVTVGFIGLQTFWKGNASELEMAESYCVGQFVKLKANVLSPRFDWPRKRGGASAAGKISWILPNGCLVVKFPGLLTFRDEANIFLADPSEVYAVSFRTCPMMIEKYQQVEDHHWTVRPVLIAFGLLTAMKLGILIGRKIGRK 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0226 427 Gene3D Transferase(Phosphotransferase) domain 1 76 163 - -
Lal17g0226 427 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG-LIKE 94 426 - -
Lal17g0226 427 SUPERFAMILY Protein kinase-like (PK-like) 90 151 IPR011009 -
Lal17g0226 427 Pfam Mind bomb SH3 repeat domain 193 305 IPR040847 -
Lal17g0226 427 PANTHER OS06G0639500 PROTEIN 94 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0226 Lal-Chr17 1408245 1411624 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0226 - - gmx:100789574 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0226 17 1408245 1411624 Lal17g0226 17 1408245 1411624 ECH
Lal17g0226 17 1408245 1411624 Lal25g1046 25 13838407 13844557 ECH
Lal25g1046 25 13838407 13844557 Lal17g0226 17 1408245 1411624 PCT
Lal17g0226 17 1408245 1411624 Lal25g1046 25 13838407 13844557 PCT