Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0225 ATGTTCGCGGCAGAGAATGGCCTAAAGGGTGACCCAAGGCTTCAAGCTATTTCTCAAGCAATAAGAGTTGTTCCCCACTTCCCTAAACAAGGTATAATGTTTCAAGACATAACGACATTGATGTTGGATCACAAGGCGTTCAAAGACACGGTCGACATATTTGTCGATCGTTATCGAGACATGCACATTTCCGTTGTTGCCGGAATTGAAGCGAGGGGATTCTTGTTTGGTCCCTCAATTGCATTGAGCATTGGTGCAAAGTTTGTTCCTCTACGCAAACCTCACAAGCTGCCAGGTGAAGTAATTTCAGAAAAATATGTTCTAGAATATGGAACTGATTGTTTGGAGCTTCATGTTGGCGCTGTCGAACCCGGTGAGCGAGCCATAGTGATTGATGATTTGGTAGCTACAGGTGGAACTCTGTCAGCAGCTATAAAACTTCTAGAACGTGTTGGGGCTGAAGTAGTGGAATGCGCTTGTGTGATTGGTGTACCTGATGTTAAGGGACAGTGCAGGCCTATAGGAAAGCCACTTTATGTACTTGTGAAGCCCCGCGAAGTAGATGAGTGTTTTTGA 576 0.4497 MFAAENGLKGDPRLQAISQAIRVVPHFPKQGIMFQDITTLMLDHKAFKDTVDIFVDRYRDMHISVVAGIEARGFLFGPSIALSIGAKFVPLRKPHKLPGEVISEKYVLEYGTDCLELHVGAVEPGERAIVIDDLVATGGTLSAAIKLLERVGAEVVECACVIGVPDVKGQCRPIGKPLYVLVKPREVDECF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0225 191 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 1 188 - -
Lal17g0225 191 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 1 188 - -
Lal17g0225 191 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Lal17g0225 191 SUPERFAMILY PRTase-like 20 171 IPR029057 -
Lal17g0225 191 TIGRFAM apt: adenine phosphoribosyltransferase 18 172 IPR005764 GO:0003999|GO:0005737|GO:0006168
Lal17g0225 191 CDD PRTases_typeI 51 183 IPR000836 -
Lal17g0225 191 Gene3D - 5 183 IPR029057 -
Lal17g0225 191 Pfam Phosphoribosyl transferase domain 55 165 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0225 Lal-Chr17 1401658 1404394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0225 11 183 PRT Gene Family AT1G27450 71.098 1.54e-89 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0225 K00759 - gmx:100499904 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0225 17 1401658 1404394 Lal17g0225 17 1401658 1404394 ECH
Lal17g0225 17 1401658 1404394 Lal21g0330 21 2201146 2209951 LSH