Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0221 ATGGGAAAACCTACAGGGAAGAAGAAGGATCCCCAAACCTCAATTTCAAAGGCCAAACGTGCATCGAAGGCTTTCGATGAAGATACCGCAGTGTTCATCAACATGTCACAAGAGCTCAAGGAAGAAGGTAACAAGTTATCTCAAAAGAAGGACCACGAAGGTGCTATGTTAAAGTACGAAAAAGCCCTCAACCTTCTTCCGAATAATCACATAGATGTTGCACACCTTCATACAAGTATGGCTACTTGTTATATGCAATTAGGTCTAGGTGAGTATCCTCGAGCCATTAACGAGTGTAATTTAGCATTACAAGTTTCACCTAGGTATAGCAAGGCTATGTTGAAAAGAGCCAAGTGTTATGAAGCGCTTAATCGATTGGATTTGGCGCTTCGGGATGTTTATCTTGTTTTGACTGTGGAACCTAATAATGTTTCCGCATTGGAATTTCGTGAGAGTTTGAAAAAGACAATGGAGGAAAAAGGTATTAGTGTAGATGAAGAAAATGATATTGCTTTGTATAATACTGTACAAGTACAACAGCCTCCTGCTCCTGTTGTGCAGAAAGTCGTAAAAGAGAAAGTAAAGAAAAAGAGAGGTAAGAAAAGTGAGGACAAGGTTGTTGGTGAGGTGGATTTGAGTCTTGTTAAGGATAAAAAAGAGGTTACAGATACAATTGAGGCCGGAAAATTGATGGTGGAAGCAGTTAAGGAAGAAAATGTAGTCAGCAGGACGGTGAAATTGGTATTTGGAGAGGATATTAGGTGGGCGCAGTTGCCGGTGAATTGTAGTATGAAGTTGGTGAGGGATGTAGTTAGGGATCGGTTCCCGGGCTTCAAGGGTGTCCTTGTTAAGTACAGGGATGAAGAAGGTGATTTGGTTACAATCACTACTACTGATGAACTAAGGCTAGCTGAGTCTTCAGCTCATACAATGGGATCGATTCGACTCTATATTACAGAAGCCAGTCCGGAGCAAGAACCTTCTTATGATGGAATAACCAAAGGGGTTGAGGTGCGAACAGATGGTAGAAAATCAAGCGACGGTATTGAGAATGGGGGTGTGGAAGAAGGTAAAGGTTTATCAAATAGGAAGACTACCGTGGAGGACTGGCTTATCCAGTTTGCGAGGCTATTCAAGAACCATGTTGGGTTTGATTCTGATTCTTATCTAGATACCCACGAGCTTGCAATGAAGCTTTATGCTGAAGCAATGGAGGATACAGTAACAAGTGATGATGCTCAAGAACTTTTTGAGATTGCTGCCGATAAATTTCAAGAGATGGCAGCTTTGGCATTATTTAACTGGGGGACTGTTCACTTGTCCAGGGCAAGGAACCAGGCTTTCTTTTCAGATGTTGGGTCAAGAGAGTATTCTATTGATCATATTAAAGCTGCATATGAGTGGGCGCAAAAGGAGTACAAGAAAGCAGAACTGAGATATGAAGAAGCCTTGAAAATTAAACCAGACTTCTATGAAGGATATCTTGCTCTTGGGCATCAGCAGTTTGAGCAAGCAAGGCTATGTTGGTGTTATGTGATGGCATTGAAGATGGATTTAGAAGGTGGCTCTGCCGACGAGGTTTTATTACTCTATAACAAGGCAGAGGACTGCATGGAGAAAGGCCTCTTGATGTGGGAGGAGATTGAAGAGCAGCGATTAAATGGACTATCCAAATCAGATAAATATAAAGCACTTCTAGAGAAAATGGGTTTGGATAATATTTTCAATGAAATTTCATCTGATGAAACTTCAGAGGAGGCTGCGAAGATGAAATCGCAGGTATATCTTTTATGGGGTACCTTATTGTATGAACGGTCTGTTGTGGAATATAAGTTAGGCCTACCAACATGGGAGGAATGTTTAGAAGTTGCAGTTGAGAAGTTTGAACTAGCTGGAGCTTCTGCAACAGATATTGCTGTTATCATAAAGAATCATTGCTCTAATGAAACATCTCTTGAAGGGTTCAAAATTGATGAGATAGTTCAGGCGTGGAATGAGATGTATGATGCTCAGGGGTGGCAGTTTCGTGCTCCATCGTTTCGGCTTGAACCATTGTTTCGCCGGTGTGTTCCTAAACTCCATGACATCTTGGAGCAATTTTAA 2103 0.4142 MGKPTGKKKDPQTSISKAKRASKAFDEDTAVFINMSQELKEEGNKLSQKKDHEGAMLKYEKALNLLPNNHIDVAHLHTSMATCYMQLGLGEYPRAINECNLALQVSPRYSKAMLKRAKCYEALNRLDLALRDVYLVLTVEPNNVSALEFRESLKKTMEEKGISVDEENDIALYNTVQVQQPPAPVVQKVVKEKVKKKRGKKSEDKVVGEVDLSLVKDKKEVTDTIEAGKLMVEAVKEENVVSRTVKLVFGEDIRWAQLPVNCSMKLVRDVVRDRFPGFKGVLVKYRDEEGDLVTITTTDELRLAESSAHTMGSIRLYITEASPEQEPSYDGITKGVEVRTDGRKSSDGIENGGVEEGKGLSNRKTTVEDWLIQFARLFKNHVGFDSDSYLDTHELAMKLYAEAMEDTVTSDDAQELFEIAADKFQEMAALALFNWGTVHLSRARNQAFFSDVGSREYSIDHIKAAYEWAQKEYKKAELRYEEALKIKPDFYEGYLALGHQQFEQARLCWCYVMALKMDLEGGSADEVLLLYNKAEDCMEKGLLMWEEIEEQRLNGLSKSDKYKALLEKMGLDNIFNEISSDETSEEAAKMKSQVYLLWGTLLYERSVVEYKLGLPTWEECLEVAVEKFELAGASATDIAVIIKNHCSNETSLEGFKIDEIVQAWNEMYDAQGWQFRAPSFRLEPLFRRCVPKLHDILEQF 700
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0221 700 Gene3D - 230 321 - -
Lal17g0221 700 MobiDBLite consensus disorder prediction 340 360 - -
Lal17g0221 700 SUPERFAMILY TPR-like 36 505 IPR011990 GO:0005515
Lal17g0221 700 ProSiteProfiles PB1 domain profile. 242 321 IPR000270 GO:0005515
Lal17g0221 700 ProSiteProfiles TPR repeat profile. 36 69 IPR019734 GO:0005515
Lal17g0221 700 MobiDBLite consensus disorder prediction 1 23 - -
Lal17g0221 700 Pfam PB1 domain 243 319 IPR000270 GO:0005515
Lal17g0221 700 SMART PB1_new 242 321 IPR000270 GO:0005515
Lal17g0221 700 CDD PB1 244 318 - -
Lal17g0221 700 Gene3D Tetratricopeptide repeat domain 371 633 IPR011990 GO:0005515
Lal17g0221 700 PANTHER PROTEIN CLMP1 1 699 IPR044517 -
Lal17g0221 700 SMART tpr_5 74 109 IPR019734 GO:0005515
Lal17g0221 700 SMART tpr_5 110 143 IPR019734 GO:0005515
Lal17g0221 700 SMART tpr_5 457 490 IPR019734 GO:0005515
Lal17g0221 700 SMART tpr_5 36 69 IPR019734 GO:0005515
Lal17g0221 700 SUPERFAMILY CAD & PB1 domains 238 330 - -
Lal17g0221 700 Coils Coil 459 486 - -
Lal17g0221 700 PANTHER PROTEIN PHOX4 1 699 - -
Lal17g0221 700 Gene3D Tetratricopeptide repeat domain 28 180 IPR011990 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal17g0221 Lal-Chr17 1366637 1370917 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0221 24 159 Calmodulin-binding Proteins AT3G25230 26.897 3.32e-06 48.5
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0221 - - lang:109326417 1097.8