Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0200 ATGGCTGGTTATTCAACAAGTGTCTCTACTTCTATTTTGGTATTTTTCCTTCTCTTAGGCTTCTCTGCAGCTAAGCAAGTATTAGTCGGTGGCAAGATAGATGCATGGAAGGTTCCATCTTCTGAAGCTGATTCCCTCAACAAATGGTCTCAAAAGGCTCGTTTCCAAGTTGATGATTATCTTGTGTGGAAATATGATGGTGGGAAAGACTCAGTGTTGCAAGTGAAGAAGGAAGATTATGCTAATTGCAACACATCAAAGCCTATAAATGAGTACAATGATGGGAACACAAAGGTGAAGCTTGACCGACCTGGACCATTCTACTTCATAAGTGGAGCAAAGGGTCACTGTGAGAATGGTGAGAAGATAGTTGTGGTGGTTATATCTCCAAAGAGGAACAGATACATTGGCATTTCTCCTTCACCTTCTCCATCACAATCATTGGAAGCTCCAGCTATTGCTCCTACAAGTAGTGCCACAGCTCTGAAAAGTGGCCTTGTGGTGATGGGTATGGGTGTATTGGCTATGTATGTGGGTGTTCTTATTTGA 549 0.4226 MAGYSTSVSTSILVFFLLLGFSAAKQVLVGGKIDAWKVPSSEADSLNKWSQKARFQVDDYLVWKYDGGKDSVLQVKKEDYANCNTSKPINEYNDGNTKVKLDRPGPFYFISGAKGHCENGEKIVVVVISPKRNRYIGISPSPSPSQSLEAPAIAPTSSATALKSGLVVMGMGVLAMYVGVLI 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0200 182 Gene3D - 23 131 IPR008972 -
Lal17g0200 182 Pfam Plastocyanin-like domain 36 120 IPR003245 GO:0009055
Lal17g0200 182 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Lal17g0200 182 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Lal17g0200 182 PANTHER BLUE COPPER PROTEIN 8 175 IPR039391 GO:0009055
Lal17g0200 182 PANTHER EARLY NODULIN-LIKE PROTEIN 3 8 175 - -
Lal17g0200 182 CDD OsENODL1_like 25 128 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0200 Lal-Chr17 1202492 1206245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0200 11 171 Phytocyanin Superfamily AT2G25060 51.534 8.78e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0200 - - gmx:100527857 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0200 17 1202492 1206245 Lal17g0200 17 1202492 1206245 ECH
Lal25g1027 25 13562902 13564238 Lal17g0200 17 1202492 1206245 PCT
Lal10g0687 10 14649518 14655231 Lal17g0200 17 1202492 1206245 PCT
Lal17g0200 17 1202492 1206245 Lal25g1027 25 13562902 13564238 PCT
Lal17g0200 17 1202492 1206245 Lal10g0687 10 14649518 14655231 PCT