Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0167 ATGGCTGAGAACAAAACAGAAGTGGTTGTGACCATTCCAAATTCTGGTGGAGAAAGCCATGATTCCAAAGGAGTTGGATCTTTAACACCTAAGCAGTGCAGGGATGATTCACTTCACACTATGTTCAATGATAATGAGGTTACTGCAAAGTCATCACCTTTACATTGTGCTTCCCCTGAGATAAGGTTCAGTCCCAGCCCAAATAAGCCCCCTAGAGTTCCTAATGCAAATGGTAACCTTATCAGAAGAAAATCACTTGCAAGGTCAGTGTATTCTAAACCCAAATCAAGGTTTGGTGAACAACCTTATCATATTGATGGTAACATGTTAGAAGATAATAGTATTTCAACTTTTCAAGAACAGTTAGGTGATAATTCGCCATATAGGAACTCTTTCGGTAATGCATCTCCTGGTAACAAATCCGGGCTGGTTAATAGAACCGCCTCTATCACTTCCGTCATCACTCCCAAGACGCCGTTGATGGGAGAGGATGAGGGAGAAATCATTTACAGGAAAGTGGAATTGAGTAAAGGAAAACGTAAGAGAGTGAAAACTAAGGTTTTAATAGAATGGTTTATATTTGTGTACCTTGTGTCTAACCTGGTGGCTAGCTTAACAGTTGAAAAACTGAAAAGGACAAATATTTGGGGTTTGGGGGTTTGGAGGTGGTCTGTGCTTTTGATTGTGACCTTTTGTGGCCACTTAGCTACAAGATGGTTCATGCGCATTGTTGTTTTCTTGATTGAAATAAACTTTCTGCTGAGGAAAAAGGTGCTGTATTTTGTCCATGGACTTAAGAAAAGTGTCCAGGTCTTCATTTGGCTTGCTCTGGTTCTTCTCACATGGGTGCTGTTAATCAATCATGTGGTCCGGCGATCTAAATTGGCCACAAAAGTTTTGGATTCTGTAACTTGGACTCTTCTCTCCCTTCTCATTGGAGCATTCTTTTGGTTGTTGAAGACATTGTTACTAAAGATTTTGGCATCGAATTTCCATGTCAAATCCTTTTTTGATCGAATTCAAGAAGCAATCTTCCACCAGTATGTTTTGCAGACTCTCTCTGGGCCTCCACTCATGGAAAATGCTGAGAAGGTCGGGGGACCGCAAAGTGTTGGTCAATTTAGTTTCAGGAGTACAACAGGGAAATGTGGTACAAAGAAAGAGGTTATAGATATGGCAAAGCTTCACAAGATGAAACAGGAGAAAGTTTCTGCTTGGACTATGAAGATTTTGGTAGATGCAGTGATGAATTCAGGACTGTCCACAATCTCTAGTTCACTAGATGAAAGTTTCTATGACGGAGGAACTGACCCAATTGATAGAGAGATAACAAATGAGATGGAAGCAACTGCTGCTGCCTATTCCATTTTCAGGAACGTTGCTGGCCCTGGTTGTGAGTACATTGATGATTACGATCTCCGGAGATTCATGATTAAGGAAGAAGTGGATCTGGTATTGCCCATACTGGCACAAGTAGAGACAGGACAAATCAACAGAAAGTCTTTAACAGAATGGGTGGTATATCAGGAACGTAAAGCACTAGCACATGCCTTATGCGACACCAAAACAGCTGTAAAACAGTTAAACAAGCTTATGACGGGGGTCATAGTAGTGGTGTCAATAATACTGTGGCTTCTACTAATGGGGATTGCAACAACAAAAGTACTTGTATTCCTCTCATCGCAGCTTGTACTCTCAGCTTTCATGTTTGGAAACACATGCAAGAATATTTTTGAAGCTATCATCTTCGTGTTTGTAATGCATCCATTTGATGTCGGTGATCGATGTGTTATAGATGGTGTTGAGCTACTGGTTGAAGAAATGAATATATTGACAACAGTCTTCTTGAAGCTTAATAATGAAAAGGTTTACTTTCCAAACTCAGTCCTAGCGACAAAACCGATCAGCAATTATTACAGAAGCCCTGACATGGGTGATAGTGTGGAGTTCTCGATTGATTTTCTGACACCGGTAGAGAAGATTGGGGCACTCAATGAAAAAATAAAAGAGTAA 2013 0.4054 MAENKTEVVVTIPNSGGESHDSKGVGSLTPKQCRDDSLHTMFNDNEVTAKSSPLHCASPEIRFSPSPNKPPRVPNANGNLIRRKSLARSVYSKPKSRFGEQPYHIDGNMLEDNSISTFQEQLGDNSPYRNSFGNASPGNKSGLVNRTASITSVITPKTPLMGEDEGEIIYRKVELSKGKRKRVKTKVLIEWFIFVYLVSNLVASLTVEKLKRTNIWGLGVWRWSVLLIVTFCGHLATRWFMRIVVFLIEINFLLRKKVLYFVHGLKKSVQVFIWLALVLLTWVLLINHVVRRSKLATKVLDSVTWTLLSLLIGAFFWLLKTLLLKILASNFHVKSFFDRIQEAIFHQYVLQTLSGPPLMENAEKVGGPQSVGQFSFRSTTGKCGTKKEVIDMAKLHKMKQEKVSAWTMKILVDAVMNSGLSTISSSLDESFYDGGTDPIDREITNEMEATAAAYSIFRNVAGPGCEYIDDYDLRRFMIKEEVDLVLPILAQVETGQINRKSLTEWVVYQERKALAHALCDTKTAVKQLNKLMTGVIVVVSIILWLLLMGIATTKVLVFLSSQLVLSAFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVIDGVELLVEEMNILTTVFLKLNNEKVYFPNSVLATKPISNYYRSPDMGDSVEFSIDFLTPVEKIGALNEKIKE 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0167 670 Gene3D - 589 638 IPR023408 -
Lal17g0167 670 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 3 670 IPR016688 -
Lal17g0167 670 SUPERFAMILY Sm-like ribonucleoproteins 579 638 IPR010920 -
Lal17g0167 670 PIRSF Memb_At2g17000 4 670 IPR016688 -
Lal17g0167 670 Pfam Mechanosensitive ion channel 530 669 IPR006685 GO:0016020|GO:0055085
Lal17g0167 670 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 9 3 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0167 Lal-Chr17 1017878 1022889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0167 58 670 Mechanosensitive Ion Channel Family AT5G12080 62.258 0.0 760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0167 K22048 - gmx:100803107 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0167 17 1017878 1022889 Lal17g0167 17 1017878 1022889 ECH