Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0166 ATGTACAGTTTCAATAACAATAGGTTTATAAACCTCGCTGAAAACCCTTCTTTCTCTTCCACCCTTCTCGACAAAATTTACAGTTCCATCGACGAAGGGGACAGAAAGAGCAACGACATGAAGTTCTATACAGAACCAACAATAACAGTGAGGAAACAGAGCAGAAGCAATTTGAATTTCATCACAGCAAATGAGAAGGTTGATATTCAACGAAGAAAACATAATATTTCGCAAATGCATCACCACCGCGTTCATCATCATGAACGAGATGTTATGTTCTTCAGCTCCATTTCAAACTCTTCTGACTCTAGCTCTGGAAGATTATCGTCTTCTGACACAGAATCAATTTACGGAATGAGATCAAAGCCTTCGTGTTTCGTACCATATCCGAAGCCTAAGCCAGTGAGGACCAACATGTCTGAAAAAACAGAGAAGAAAATCACTGAGAGAAAACAAAGCAATATGTTTCTAGAACAGAAGAAGGATGCACAAATATTCGATAGTTATCCAATTTATTCTAATATTGAAAGCAGTGAAGAGGGTTTAATCAAATCCAAATCTCGAGCCATGAAGATTTACAACAATCTGAAGAAAGTGAAGCAACCAATATCTCCAGGTGGAAAACTCACAAATTTTCTTAACAAACTATTTGCAACAGGGAACAACACAAAGAAACCAAAGAGTACTTCCTCTGTTGCAGACACAAAATCTGAGAGAAAAACACAAGCGGCGTCTACATGTTCTTCAGCATCATCGTTCTCAAGGTCTTGTTTAAGCAAGACTTCACCTTCTTCAAGAGAAAAGTTGCGCAGTAATAACGGTGTTAAAAGAACAGTGCGATTTTACCCTGTAAGTGTGATCATTGATGAAGATAGTAGACCATGTGGTCATAAAAACTTGTATGAAGAAAAAGAGTTACAACAACAACAGAAGAAGAGTAATTTGCTTCCAACGAGAATTGACGATGATGCAGCAAGTGATTCAAGTTCTGATCTTTTCGAACTTGATCACCTAACAGTGTTTGGAGATGATGATTTGTATTTTGAGGAGCTTCCAGTGTATGAGACTACTCATCTTAATGCTAATCGTGCCATTGCTAATGGCCGAATAATGAAGTTCTAA 1122 0.3779 MYSFNNNRFINLAENPSFSSTLLDKIYSSIDEGDRKSNDMKFYTEPTITVRKQSRSNLNFITANEKVDIQRRKHNISQMHHHRVHHHERDVMFFSSISNSSDSSSGRLSSSDTESIYGMRSKPSCFVPYPKPKPVRTNMSEKTEKKITERKQSNMFLEQKKDAQIFDSYPIYSNIESSEEGLIKSKSRAMKIYNNLKKVKQPISPGGKLTNFLNKLFATGNNTKKPKSTSSVADTKSERKTQAASTCSSASSFSRSCLSKTSPSSREKLRSNNGVKRTVRFYPVSVIIDEDSRPCGHKNLYEEKELQQQQKKSNLLPTRIDDDAASDSSSDLFELDHLTVFGDDDLYFEELPVYETTHLNANRAIANGRIMKF 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0166 373 MobiDBLite consensus disorder prediction 253 269 - -
Lal17g0166 373 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 64 371 IPR039621 GO:0009734
Lal17g0166 373 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 6 56 IPR039621 GO:0009734
Lal17g0166 373 PANTHER PROTEIN BIG GRAIN 1-LIKE B 6 56 - -
Lal17g0166 373 PANTHER PROTEIN BIG GRAIN 1-LIKE B 64 371 - -
Lal17g0166 373 MobiDBLite consensus disorder prediction 219 247 - -
Lal17g0166 373 MobiDBLite consensus disorder prediction 307 328 - -
Lal17g0166 373 MobiDBLite consensus disorder prediction 253 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0166 Lal-Chr17 1009514 1010635 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0166 - - lang:109328220 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0166 17 1009514 1010635 Lal17g0166 17 1009514 1010635 ECH
Lal17g0166 17 1009514 1010635 Lal25g1150 25 14904393 14909046 ECH
Lal7g1062 7 16703124 16704263 Lal17g0166 17 1009514 1010635 ECH
Lal14g1660 14 16859920 16861008 Lal17g0166 17 1009514 1010635 ECH
Lal20g1044 20 14233949 14235145 Lal17g0166 17 1009514 1010635 ECH
Lal18g0130 18 1024446 1025660 Lal17g0166 17 1009514 1010635 ECH