Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0164 ATGAGTTTGAGTAATGCAACAAAGGATGATTCTTCTTCCTCTGCTTCTGCTTCTTCTTCAGAGATTCAGATACCAGCAGAAATAGATTGGCACATGCTTGACAAGTCCAAGTTTTTCTTCCTAGGCGCCGCCTTATTCTCTGGTGTTTCAGCTGCTCTTTATCCTATGGTTGTGTTGAAGACACGTCAGCAATGTTCTTCAGCACAATACTCTTGTCTCAACATGTCTTGTGCCATTATGCGCTATGAAGGATTCAGAGGTTTTTACAAAGGTTTTGGAACTTCTTTGATGGGAACAATCCCTGCTCGCGCACTTTACATGGCTTCTCTTGAAGTTACCAAGAGTAGTGTTGGCACTGCTCTTCTTGATGTGGGGTTTTCAGATACCACTGCCACTGCTATAGCTAATGCTGCTGGTGGTGTCACTTCTGCTATGGCTGCACAAATGATTTGGACACCGATTGATGTTGTGAGCCAAAGACTTATGGTTCAAGGCTGCAACAACAGCAGCAACACTAAAAATATACTAACCAATCTTAATTCTGAGAATTACAGGAATGGCTTGGATGCATTCAGGAAAATTCTTTGTGCTGATGGAGCAAGAGGGTTCTATAGGGGGTTTGGGATATCAATATTGACTTATGCACCATCCAATGCTGTTTGGTGGACTTCTTACTCAATGGTGCATAGGCTCATTTGGGGTGCTTTTGGTAGCTATATGAGTAAGAGGGATGAGGGTAGTTTGGTCAATGGAGGGTGTGGTTTTAGGCCTGATTCTAAGGCAATGGTGGCTGTGCAAGGGTTGAGTGCTGTTATGGCAAGTGGGGTGTCAGCAATTGTGACAATGCCATTTGACACAATCAAGACAAGGTTGCAAGTGTTGGATAGTGAGGAAAATGGGAGAAGGAGGCCTTTAACCTTTGTGCAAACTGTGAAGAATTTGGTGAATGAAGGTGGATTGCTTGCTTGCTACAGAGGATTGGGACCTAGGTGGGCTTCAATGTCAATGTCTGCAACAACAATGATTACAACCTATGAGTTTTTGAAACGGATGTCTACAAAGAGTGAAGATAGTGTTGATCTTTTACTTTACTTAAATCTCGAGGATGAAATGGATAGGGCTCTGGCCCTTGCGAGTCATAAAAGGACGAACAAAGTTGGGGCAATTCCACCACAGTGCTGCCTCATTAGTTCTTCAAGTCTGATAATGTCTGCCTCAGTTCTTGCCCTTGTCATTGCATCTGCTGAATTTAAAGATCTTCTCAGTACTCTGATCTGCTTCACAACACTTTTGATCTGTGCACATAAACATATATAA 1317 0.4282 MSLSNATKDDSSSSASASSSEIQIPAEIDWHMLDKSKFFFLGAALFSGVSAALYPMVVLKTRQQCSSAQYSCLNMSCAIMRYEGFRGFYKGFGTSLMGTIPARALYMASLEVTKSSVGTALLDVGFSDTTATAIANAAGGVTSAMAAQMIWTPIDVVSQRLMVQGCNNSSNTKNILTNLNSENYRNGLDAFRKILCADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRLIWGAFGSYMSKRDEGSLVNGGCGFRPDSKAMVAVQGLSAVMASGVSAIVTMPFDTIKTRLQVLDSEENGRRRPLTFVQTVKNLVNEGGLLACYRGLGPRWASMSMSATTMITTYEFLKRMSTKSEDSVDLLLYLNLEDEMDRALALASHKRTNKVGAIPPQCCLISSSSLIMSASVLALVIASAEFKDLLSTLICFTTLLICAHKHI 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0164 438 Gene3D Mitochondrial carrier domain 177 414 IPR023395 -
Lal17g0164 438 SUPERFAMILY Mitochondrial carrier 32 348 IPR023395 -
Lal17g0164 438 ProSiteProfiles Solute carrier (Solcar) repeat profile. 131 231 IPR018108 -
Lal17g0164 438 ProSiteProfiles Solute carrier (Solcar) repeat profile. 261 351 IPR018108 -
Lal17g0164 438 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 15 358 - -
Lal17g0164 438 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 15 358 - -
Lal17g0164 438 Gene3D Mitochondrial carrier domain 4 176 IPR023395 -
Lal17g0164 438 Pfam Mitochondrial carrier protein 132 233 IPR018108 -
Lal17g0164 438 Pfam Mitochondrial carrier protein 264 355 IPR018108 -
Lal17g0164 438 Pfam Mitochondrial carrier protein 47 116 IPR018108 -
Lal17g0164 438 ProSiteProfiles Solute carrier (Solcar) repeat profile. 34 116 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0164 Lal-Chr17 998888 1001731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0164 1 357 Chloroplast and Mitochondria Gene Families AT5G26200 63.687 8.68e-159 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0164 K15121 - gmx:100784202 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0164 17 998888 1001731 Lal17g0164 17 998888 1001731 ECH
Lal17g0164 17 998888 1001731 Lal4g0177 4 1113979 1115043 LSH