Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0160 ATGAAACAAGCTGAGATGAATTGCCTTAGATCCAGGCAAATCATGGTGTTATGTGGAAAAAAAAGCATGGAGATAGCACTTTTATCCTTAGAAACAAAAGGTTCTGAAGAGGATCATAATGGTTGCAATATGGACGATGGACTTTGTATTACAGCAGTCACACTCATGCCACTGAAACAGGGAGGAAAAGGAGAAGTTCCTTTCTTGGATACAGTATCCCAAAATAAAAGCTCTTTGGTTGTTGGCAATGAAGTTTTAACGCCAGAAAGTGAGGATGATTCATTATTGTTGGAAGGTGATCCAATTGTCAATAGTTCCTGTCCTCTTTCAGTAGTCAGTGAGAACAGTTGTGCATGCGAAGATGAGTTGAGGGTCACTTATGAGGGTATAGCAGATTTAGGGACAAGTAGTTCCATTGACATGGAGAAGAGCAATTGTGCTGTCAGTGTTGTTGCCAGAGCTGCTGATTTGGCTGAGTCAAATGTGGAGGCAGATATTATGAGTGAACCCCTAGATGTAGCAGTGAGCTATGAGGAAGAGACAGGAATTAAAACCAGTTCAAAGCCTACTACAGTGGTTCTTCATCATCAGATACCTCCGGAAAAAGGGGTGAGTGGAACAGTTTGTCGGGGTGTTTTTGAATTGGATTGTATCCCACTTCTACCTGAGATGGAAGATGCAGTTGTAGTTGTACCTCGGTACTTGAAAATTCCTATTCAAATGCTAATTGGTGATAGGGTAATTGATGGAATGAACACATGCTTTAGTCAGCAGACAACTCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTGGCAAATTATTGTCGTGATCGTTTACATTTGGCATTCTCTGAGGAAATAGAATTTGTCAAGGAAGGTCTAATAGTTGGAAAAACCAAGGGTGATTGTCAAGATCAGTGGAAAAAAGCTTTCACCCATTGTTTTTTAAAGGTTGATGCTGAAGTTGGGGGAAGTGCTAATTGTGAATCTGTTACCCCAGAAACTGTTGGATCCACTGCTGTTGTTGCTATTATCTGTTCATCTCATATCATAGTTTCAAACTGTGGTGATTCAAGAGCGGTTCTCTGTCGTGGCAAAGAACCCATGGCATTATCTGTCGATCATAAACCAAATCGAGATGATGAGCGTGCAAGAATTGAGGCAGCCGGAGGCAAGGTGATACAATGGAATGGTCATCGTGTACTTGGTGTACTTGCAATGTCACGGTCCATAGGCATGTACTTCTTAATCATAAGTGATCGATATCTGAAGCCATGGATTATTCCAGAACCAGAAGTTACTTTTCTTCCTCGTGCCAAAGACGATGAATGTCTGATTCTGGCCAGTGATGGTCTGTGGGATGTAATGACGAATGAAGAGGCATGCCACATAGCCCGGAGACGAATACTTCTCTGGCACAAGAAAAATGGCTCGACACTGCCATCAGTAAGGGGAGAGGAAAGTGATCCTGCTGCACAAGCAGCTGCGGAGGACCTATCGAACCATGCTCTTCAGAAAGGAAGCAAAGATAACATCACTGTGATTGTGGTGGATTTGAAAGCTCAAAGAAAATTTAAGAGCAAAACATGA 1599 0.4234 MKQAEMNCLRSRQIMVLCGKKSMEIALLSLETKGSEEDHNGCNMDDGLCITAVTLMPLKQGGKGEVPFLDTVSQNKSSLVVGNEVLTPESEDDSLLLEGDPIVNSSCPLSVVSENSCACEDELRVTYEGIADLGTSSSIDMEKSNCAVSVVARAADLAESNVEADIMSEPLDVAVSYEEETGIKTSSKPTTVVLHHQIPPEKGVSGTVCRGVFELDCIPLLPEMEDAVVVVPRYLKIPIQMLIGDRVIDGMNTCFSQQTTHFFGVYDGHGGSQVANYCRDRLHLAFSEEIEFVKEGLIVGKTKGDCQDQWKKAFTHCFLKVDAEVGGSANCESVTPETVGSTAVVAIICSSHIIVSNCGDSRAVLCRGKEPMALSVDHKPNRDDERARIEAAGGKVIQWNGHRVLGVLAMSRSIGMYFLIISDRYLKPWIIPEPEVTFLPRAKDDECLILASDGLWDVMTNEEACHIARRRILLWHKKNGSTLPSVRGEESDPAAQAAAEDLSNHALQKGSKDNITVIVVDLKAQRKFKSKT 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0160 532 ProSitePatterns PPM-type phosphatase domain signature. 262 270 IPR000222 GO:0043169
Lal17g0160 532 Gene3D - 220 532 IPR036457 -
Lal17g0160 532 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 93 532 - -
Lal17g0160 532 Pfam Protein phosphatase 2C 249 515 IPR001932 -
Lal17g0160 532 ProSiteProfiles PPM-type phosphatase domain profile. 201 522 IPR001932 -
Lal17g0160 532 PANTHER ALPHABET, ISOFORM E-RELATED 93 532 - -
Lal17g0160 532 CDD PP2Cc 222 522 IPR001932 -
Lal17g0160 532 SMART PP2C_4 199 520 IPR001932 -
Lal17g0160 532 SUPERFAMILY PP2C-like 223 523 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0160 Lal-Chr17 980292 983869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0160 150 532 PP2C-type Phosphatase Gene Family AT1G17550 56.328 2.47e-146 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0160 K14497 - gmx:100791754 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0160 17 980292 983869 Lal17g0160 17 980292 983869 ECH