Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0149 ATGTTTGATATTGAGGCTCTTTGGTTACTCCTCCAGCACTTCGTTGGAAAAACAGATCTCATTTCAGAAAAAGCATCGCTTTTCCGGTACCTCCCAGAATCAATGACGAACTCAACTTGCGGAGGAAGAGGATTAGACATATGCCGAGATGAATCTGCTGCATTCGTTCTCAAATTCGTTGCCATCGCTTCCATCTTACTCGCTGGCTTCGCCGGAGTTGCTATACCGCTTATCGGAAAACACAGTCGATTCCTCCGAACAGACAGCAACCTCTTCGTCGCCGCCAAGGCCTTCGCGGCGGGGGTGATCCTTGCCACCGGGTTCGTGCACATGCTTTCAGACGCGACCGACGCGCTCAACGACCCGTGTCTGCCTGAGTTTCCGTGGTCCCAGTTTCCGTTTACCGGTTTCTTCGCAATGATGGCGGCGTTGTTCACGCTTCTCCTTGATTTTGTTGGAACACAGTATTATGAGAGGAAGCAAGGGGTGAATCGGGCGACTGAGGAGCAAAATCGGGTCGGGTTTATTGAACCGGGTGAGGAATCATCAGGGATTGGTGGGAAGGTGTTTGGGGAAGAGGAGAGTGGTGGAATGCACATCGTGGGGATGCATGCACACGCGGCGCACCATAGACATAACCACCCTCATGGACAGGATTCTTGTGGCGGCGCTGCCAAGCAACATGGCCATGTGCACGGACATACCCATGGACACGCGCAATCGCTTACTGATGTCGTTGAGGATGAACCTGACGTCCGACACGTTGTCGTTTCGCAGGTGCTGGAGCTTGGGATCGTATCACATTCAGTGATAATTGGGTTGTCTTTAGGAGTTTCACAAAGTCCTTGCACCATAAGACCTCTAATTGCTGCACTCTCTTTCCATCAGTTCTTTGAAGGGTTCGCACTTGGAGGGTGTATCTCCCAAGCACAATTTAAGAACTCATCAGCAGCAATAATGGCTTGTTTTTTTGCACTGACTACCCCATTGGGTATTGGCATTGGGATAGGCATTGCTTCAGTGTATAACCCTTACAGTGCAGGGGCACTCATCACTGAAGGAATCCTAGATTCATTGTCAGCAGGAATTTTAGTGTATATGGCTTTAGTGGACTTGATAGCTGCTGATTTTCTTAGCAAAAGAATGAGTTGTAACTTTAGGCTACAGATTGTTTCTTACTGTATGCTTTTCCTCGGGGCTGGATTGATGTCTTCCCTCGCAATCTGGGCCTGA 1233 0.4939 MFDIEALWLLLQHFVGKTDLISEKASLFRYLPESMTNSTCGGRGLDICRDESAAFVLKFVAIASILLAGFAGVAIPLIGKHSRFLRTDSNLFVAAKAFAAGVILATGFVHMLSDATDALNDPCLPEFPWSQFPFTGFFAMMAALFTLLLDFVGTQYYERKQGVNRATEEQNRVGFIEPGEESSGIGGKVFGEEESGGMHIVGMHAHAAHHRHNHPHGQDSCGGAAKQHGHVHGHTHGHAQSLTDVVEDEPDVRHVVVSQVLELGIVSHSVIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFKNSSAAIMACFFALTTPLGIGIGIGIASVYNPYSAGALITEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIVSYCMLFLGAGLMSSLAIWA 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0149 410 MobiDBLite consensus disorder prediction 210 236 - -
Lal17g0149 410 Pfam ZIP Zinc transporter 56 407 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lal17g0149 410 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 35 410 - -
Lal17g0149 410 PANTHER ZINC/IRON TRANSPORTER 35 410 - -
Lal17g0149 410 TIGRFAM zip: ZIP zinc/iron transport family 44 410 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0149 Lal-Chr17 914375 921924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0149 20 410 Inorganic Solute Cotransporters AT1G60960 67.640 8.54e-178 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0149 K14709 - gmx:100812212 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0149 17 914375 921924 Lal4g0165 4 1034090 1036947 LSH
Lal8g0722 8 5141412 5147883 Lal17g0149 17 914375 921924 PCT
Lal25g1012 25 13393944 13397633 Lal17g0149 17 914375 921924 PCT
Lal17g0149 17 914375 921924 Lal8g0722 8 5141412 5147883 PCT
Lal17g0149 17 914375 921924 Lal25g1012 25 13393944 13397633 PCT