Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0140 ATGGATATTGGAGCAGTAGGTTTTGATGGGTTGGTGGGTTCAGAAGTTGTTTCAGATCCTGAGACAAAGCACAATAAGTGGTACGGATTTGGGTTCCTTAAGCATGAGAGATCTGGAACAACAACTGAAGATGACTTGAGGAGTTCTAAACTGTCTAAGACTATTAATGACATGTCTTTTCTCTCAAAACCAATGCTTTTCAAGAACAATAACAACTCATTACTTAGATCTAATGCTACTCTCTTTTCAGATGCTCAACAAATGCTTACTTTCTCTTCTCCTAAATCTGAGTCTTTCTTAGTGGATAAGTCCTCCCAAAATCCCACTTTTCCATTTTCCTATCACCCCTTATCCACTTACAACAAAAATACAGGTTACAGTTCTGAAAGCATGCATGGGATTCTAGCTGGGACAAGAGGGCTATTCACTCCTTCTCAGTGGATGGAGCTAGAACACCAAGCCCTGATCTACAAGTACATAATAGCAAATGTTCCTGTACCATCTCATCTACTCACCCCTATCAAGAAAGCCCTTGACTCTGCTGGCTTCTCTAACTTCTCAACTGGTCTTCTCAGACCCACTGCAATGGGATGGGGAGGTTTCCATCTGGGATTCTCAAACAACACCGATCCGGAGCCTGGAAGGTGTAGGAGAACAGATGGGAAGAAATGGCGATGCTCGAGAGATGCCGTTGTGGATCAGAAGTATTGTGAACGGCATATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCCTTACTGGGACCACTTCTACCACTAACACTACAAATAGTGCCATCACCACCGCTTCGAAGCAAATGATGATGCCTGATAACAATGCAGTGGTACCCAGGAGCAGTGCATCAAACAACCTCACCTTTACACAACAACATGAACCCAAGAATATGCACACTCTTGCATCTGATACTCCTGCTCCTAACAACATCAACAAGATGTTTATGAACAAGGAGAGTGGCAGTGAGAAAATCCCCAATGCCGATGATGCCCTTCCGATGCTGCCTCCCACTCTTGAGCTGAATCCCAAAGAAAACCCCTTAATGATGCATAAACAGGAATTCCAGTATGAGGAATCCTCAAGGAATGAGTTTGGTTTTGTCACTTCTGATTCCCTACTTAACCCTTCACAGAAAAGCTCTACCTTGCAGACAAGCAGCAGAAGCTTCGGTTCATCGCAAAACCAAACTAACCAAGAAACAGATTCTCAACATTTCCTTAGACATTTCATTGATGACTGGCCTAAAACTCAGTCTAATCGTCCAGATCTCGCTTGGCCTGAACTTCACATGCAATCAGACAGGACCGATTTATCAATTTCGGTCCCAATGACTTCCACTTCCTCTCCCTCCAACGAGAAGGTCACACTGTCTCCTCTTCGACTATCAAAGGAGTTAGACCCAATTCAAATGGGTTTAGGTGTGGGAAATGCTCTCAACGAGTTGAGCAACACTAAGGAAGCTAATTGGATTCCAATTACTTGGGAAAGTACTACAATGGGTGGTCCTCTTGGAGAGGTTCTGAATGTTAGCAATAATAATAACAATACATGTGATCACAGTGCTAAGAACAACTCCTCTTCTGCCCTTAACCTCATGAGTGATGTGTGGGACAATAGTTCCTCCTTAGGGTCTTCTCCTACTGGGGTCTTACAAAAGACAACATTTGGATCTTTATCTAATAGCAGTGCTGGTAGCAGTCCAAGGGCAGAGAAGAAAACCCAAGAAGGAAACACCTTCTGCAATCATCTCATTGCTTCAACTCTTGGGAATTGA 1812 0.4376 MDIGAVGFDGLVGSEVVSDPETKHNKWYGFGFLKHERSGTTTEDDLRSSKLSKTINDMSFLSKPMLFKNNNNSLLRSNATLFSDAQQMLTFSSPKSESFLVDKSSQNPTFPFSYHPLSTYNKNTGYSSESMHGILAGTRGLFTPSQWMELEHQALIYKYIIANVPVPSHLLTPIKKALDSAGFSNFSTGLLRPTAMGWGGFHLGFSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHALTGTTSTTNTTNSAITTASKQMMMPDNNAVVPRSSASNNLTFTQQHEPKNMHTLASDTPAPNNINKMFMNKESGSEKIPNADDALPMLPPTLELNPKENPLMMHKQEFQYEESSRNEFGFVTSDSLLNPSQKSSTLQTSSRSFGSSQNQTNQETDSQHFLRHFIDDWPKTQSNRPDLAWPELHMQSDRTDLSISVPMTSTSSPSNEKVTLSPLRLSKELDPIQMGLGVGNALNELSNTKEANWIPITWESTTMGGPLGEVLNVSNNNNNTCDHSAKNNSSSALNLMSDVWDNSSSLGSSPTGVLQKTTFGSLSNSSAGSSPRAEKKTQEGNTFCNHLIASTLGN 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0140 603 ProSiteProfiles WRC domain profile. 210 254 IPR014977 -
Lal17g0140 603 MobiDBLite consensus disorder prediction 566 590 - -
Lal17g0140 603 ProSiteProfiles QLQ domain profile. 141 176 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal17g0140 603 Pfam QLQ 142 174 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal17g0140 603 PANTHER GROWTH-REGULATING FACTOR 9 22 589 - -
Lal17g0140 603 PANTHER - 22 589 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lal17g0140 603 MobiDBLite consensus disorder prediction 241 270 - -
Lal17g0140 603 Pfam WRC 211 253 IPR014977 -
Lal17g0140 603 SMART QLQ_2 140 176 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal17g0140 603 MobiDBLite consensus disorder prediction 381 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0140 Lal-Chr17 860889 864789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0140 1 569 GRF Transcription Factor Family AT2G22840 41.385 7.38e-101 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lal17g0140 WRC 5.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0140 - - aprc:113865097 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0140 17 860889 864789 Lal17g0140 17 860889 864789 ECH