Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0128 ATGAGTGTCCGTAATGTTTCAGAATGTTTCATCAAACCACTATATCCTCTTGAAGAGTCAAACCAAATTTGCTACTTATCACCACAAGACATTGCTATGTTGTCTGCCAACTACATCCAAAAGGGTCTCCTTTTCAATAACCCTCCTGCACTATCACAAGACCAACAAGGTTTTGTGATCCAGAATCTGTTGGACAAACTCAAACACTCTCTTTCTCTTGCCCTTAACCTTTTTTATCCTTTGTCTGGTCGCCTTGTTACTCAGACAACCCAAGATCCTCCATCTTATGTTGTTTTTGTTGATTGTAGTAGTAAAAGTCCTGGAGCTAGATTTATACATGCAACTTTAGACATGACCATATCTGATATCCTATCTCCCATTGATGTTCCACCTATTGTTCAATCATTTTTTGATCATCATAAAGCACTCAATCATGATGGTCATACTATGCCTTTGTTGTCCATCAAAGTCACTCAATTATTGGATGGTGTTTTCATAGGATGTTCCATGAATCATTGTATTGCTGATGGGACTTCCTATTGGAATTTCTTTAATACATGGTCAAAGATATTCCAAGATCCTCATGTTCCCATTTCATACCAACCCATTCACAATCGTTGGTTTCCAGAGAATTGTGATCCACTAATCAATCTTCCCTTCAGACATCATGATGAGTTTATTAGCAGATTTGAAGCACCAAAGCTTAGAGAGAGAATATTTCATTTCACAGCAGAGTCTATTGCAAAATTGAAAGCTAAGGCCAACAAAGAATTTAATACTAACAAAATCTCTTCATTCCAATCATTGTCAGCGCTTGTTTGGAGATCTGTAACTCGTGCGCGCAGCGTACCACATGATCAAGTAACTAGCTGCAAATTATCCACAAACAATCGAACAAGAATCGAACCACCCGTGGCAGAGGAATACTTTGGCAATTTGATTCATTTGGTAATTGCAAGAACTACGGCAAGGGAATTGCTTGAACATGATCTTGGATGGGCAGCATGGAAGGTGCACCATGCTGTTGCTAACCATAATGACTCAGTTGTGCAACAATTCATGAAGGATTGGGTACAATCTCCTTTTGTATATCAACCCGGAAAGCTCACTGACCCTTACACTGTGTTGATGGGAAGTTCACCGCGGTTCAACATGTATGGGAATGAATTTGGAATGGGAAAAGCTGTTGCAGTTCAAAGTGGGTATGCAAACAAATTTGATGGCAAAGTGACATCATATCCAGGCCGTGAAGGAGGGGGAAGCATAGATTTGGAAGTGTGCCTTTTCCCACATACAATGAGCGCCCTGGAATCGGATGAGGAGTTCATCAATGCAGTTTCTGTGTTCAATCCCATATCCTAG 1362 0.4016 MSVRNVSECFIKPLYPLEESNQICYLSPQDIAMLSANYIQKGLLFNNPPALSQDQQGFVIQNLLDKLKHSLSLALNLFYPLSGRLVTQTTQDPPSYVVFVDCSSKSPGARFIHATLDMTISDILSPIDVPPIVQSFFDHHKALNHDGHTMPLLSIKVTQLLDGVFIGCSMNHCIADGTSYWNFFNTWSKIFQDPHVPISYQPIHNRWFPENCDPLINLPFRHHDEFISRFEAPKLRERIFHFTAESIAKLKAKANKEFNTNKISSFQSLSALVWRSVTRARSVPHDQVTSCKLSTNNRTRIEPPVAEEYFGNLIHLVIARTTARELLEHDLGWAAWKVHHAVANHNDSVVQQFMKDWVQSPFVYQPGKLTDPYTVLMGSSPRFNMYGNEFGMGKAVAVQSGYANKFDGKVTSYPGREGGGSIDLEVCLFPHTMSALESDEEFINAVSVFNPIS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0128 453 Pfam Transferase family 3 442 - -
Lal17g0128 453 Gene3D - 1 218 IPR023213 -
Lal17g0128 453 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 446 - -
Lal17g0128 453 Gene3D - 225 438 IPR023213 -
Lal17g0128 453 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 3 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0128 Lal-Chr17 793663 795024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0128 67 437 Monolignol Biosynthesis Gene Families AT5G48930 26.750 4.05e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0128 - - gmx:100775661 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0128 17 793663 795024 Lal17g0128 17 793663 795024 ECH