Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0124 ATGGCTCTTCTTCTAGACAGCAACAACAACAACAACTGTATAGACATTTTACTCTCTCTTGATTCACACAAATCAGTTCCTGCACCTTTCCTCACCAAAACATACAACCTCGTCGATGATCCAACCACCGATTATATTGTCTCTTGGGGCGAAAACGACACCACCTTCGTCGTTTGGCGTCCCTCTGACTTCTCCAGAGACCTTCTTCCTAACTACTTCAAACACAACAACTTCTCCAGCTTCGTTCGCCAACTCAACACCTATGGTTTTAGAAAGATTGTACCAGACAGATGGGAATTTGCTAATGAATTATTCAAGAAAGGAGAGAAACACTTGCTATGTGAGATCCATAGAAGAAAAACATCGATGCCTCAACAAGTTTCCATGAATCATTACCATGACTCTTCACTAGGAATCGGTGTTCCTTCTTTCTTTCCCTTCACAAGCAGACTCAGCAACTCTCCACCCTATGATTCAGATGAACAACCCAATTGGTGTGACTCTCCGCCACCCACTTCAGTCATTAACGGAGGCGCTGCTAACTATAACACTTCCGTTACGGCTTTGTCGGAGGATAATGAAAGGCTGAGGAGGAGCAACAATATGCTGATGTCAGAGCTTGCAGACATGAAGAAGCTTTATAACGATATTATCTACTTTGTTCAGAACCATGTCAAGCCTGTGGCTCCTAGCAACACTTACTCACCTTCTCCTTTCATATTTTGCAATGCATCGCAACAACAAGCACCGTCTCATGTTCCAATGGCGCAAAGGCCAATGAACCAGATTTTAGGTTATCATTCTACTACCACTAACCCTAAGCAATCATTTCAACCACAACATCAAGCACGTGTTCTTAACTCTCCCCCCAACACTTCGAGTAATTCAGTTTCTGTTGTTGAAGGGCATAGTAGTAATATCAGCAAGACTAAGCTTTTTGGAGTGTCACTACAGTCCAAGAAAAGGGTGCACCCGGAGTATGCTAATTTGAGTAATTTCACAAACTCAGAGACCAACAAGGCTCGTCTGATTTTGGAAAAAGATGACTTGGGCTTGAATCTCATGCCTCCTAATTTCTCTTATAATTAG 1089 0.4261 MALLLDSNNNNNCIDILLSLDSHKSVPAPFLTKTYNLVDDPTTDYIVSWGENDTTFVVWRPSDFSRDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANELFKKGEKHLLCEIHRRKTSMPQQVSMNHYHDSSLGIGVPSFFPFTSRLSNSPPYDSDEQPNWCDSPPPTSVINGGAANYNTSVTALSEDNERLRRSNNMLMSELADMKKLYNDIIYFVQNHVKPVAPSNTYSPSPFIFCNASQQQAPSHVPMAQRPMNQILGYHSTTTNPKQSFQPQHQARVLNSPPNTSSNSVSVVEGHSSNISKTKLFGVSLQSKKRVHPEYANLSNFTNSETNKARLILEKDDLGLNLMPPNFSYN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0124 362 Gene3D - 22 121 IPR036388 -
Lal17g0124 362 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 17 355 IPR027725 -
Lal17g0124 362 MobiDBLite consensus disorder prediction 272 302 - -
Lal17g0124 362 PANTHER BNAC06G00310D PROTEIN 17 355 - -
Lal17g0124 362 Coils Coil 186 213 - -
Lal17g0124 362 ProSitePatterns HSF-type DNA-binding domain signature. 69 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lal17g0124 362 SUPERFAMILY "Winged helix" DNA-binding domain 27 119 IPR036390 -
Lal17g0124 362 SMART hsfneu3 26 119 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lal17g0124 362 Pfam HSF-type DNA-binding 30 119 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lal17g0124 362 PRINTS Heat shock factor (HSF) domain signature 30 53 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lal17g0124 362 PRINTS Heat shock factor (HSF) domain signature 68 80 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lal17g0124 362 PRINTS Heat shock factor (HSF) domain signature 81 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0124 Lal-Chr17 749740 751271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0124 24 355 HSF AT1G46264 56.812 1.18e-112 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lal17g0124 HSF_DNA-bind 1.6e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0124 K09419 - gmx:100781389 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0124 17 749740 751271 Lal17g0124 17 749740 751271 ECH