Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0094 ATGAGTCATCAGCCTAATAAACAATTCTCTCATTCACCGTTATCACACAGTGACGGTAGTTTACGACAAACACTTCAGCAGCGCAGGCTTACACGGCAGAGGAGGCTCCGTTACTTGACGGACCAAGACGCTGGCGTCCATTCCACGTCATCTTTACCGGCTTCTCCTCTTCGTTCTTTTAACTCCGGTGGTTCTTGTTCCGATCACTGGTCCTCTTCCGCTATCCCTCAACCGTTGCCTCTTCCTGAAACGCCGTTGACTCATCGACCCGAACCAATCACTCCCAATTCTGGATATTATGCCAATATCGGATCTCCTTCCTTTGAACATCAGGCCTTTGCCTTTTCCAGGAAGTCGGTGGGTTATGATTCAGTGAAGGACTTTAGATCTTCAAGCATTTTGGGTAGATCCTCTTTTGATGCAATAACTGCAAATGCAAATTATGACTTGAAAGTCAACATTCCAGCTACAAGAGTCTTGGCAGGCAACAGTTCATGTAAGGATCCCAGAGAACTCTCTCATCAAAGTATTTCCAACATGAAATTCCATTTTGCTGCCAAGAGTGCCCCAACTAGCATACTCTCTAGTCCTGTTACTAGTCCTCGTAGGGCTAGCGATGTAGATTTATTTGATCCTTCGGTTGATTTTCATCGAGATTTTAATGATATTTTGAAAGTGTCACCGGCTAAAACTGTTCGTAGTCCAGACCATTCTCCACTCCGTAGCCCGCGGAGTCATAGTCCTTTCCTCAATACTAACACCCAAGATGGATCTAAGCAACCTAAATATTGCTCCCGAGTGTGGCCTGAAAATAACCACATTGATGCACACCCCTTGCCCCTTCCTCCTAAACCTTCATCGCCGGCACAATCATGTACACAGCATCAATCAAGTATCATGATGCATCACACTGCAGAAAATTCACCTTCAATGAAAGGTCAATGGCAGAAGAGAAAACTTATCGGACGTGGATCATTTGGAAGTGTTTATCATGGAACCAACCTAGAGACTGGAGCCTCATGTGCTATGAAAGAGGTGGATTTGATTCCTGATGATCCTAAATTTGCTGACTGCATAAAGCAACTAGAGCAGGAAGTCAGAATTCTTCGTCAACTAGACCACCCTAACATTGTGCAGTATTATGGCAGTGAAATAGTTGGGGATCACTTGTACATATACATGGAGTATGTACATCCTGGATCAATTAATAAATTTATGCATGATCATTGTGGAGCTATGACGGAATCTGTAGTTCGCAATTTCACACGCCATATTCTTACTGGACTGGAATACTTACATAGTATGAAGACTATCCATAGGGATATCAAAGGTCCAAACTTGCTGGTTGATGCATCGGGCACTGTCAAGCTAGCAGATTTTGGCGTGGCAAAAATTCTGACGGAGAAATCATATGAACTTTCATTGAAAGGGAGTCCCTACTGGATGGCTCCAGAGCTCATGATGGCTGCCATAAAGAAAGAATCCAGTCCAAACCTTGCAATGGCCATTGATATATGGAGCTTAGGGTGCACCATCATTGAGATGCTGACAGGAAAACCTCCATGGAGCGAATTTCAAGGGCCTCAAGCTATGTTCAAAGTACTGCACAAATCCCCAACTATACCCGAAAATTTATCTTCAGAGGGACAAGATTTCCTTCGGCAGTGTTTCAAAAGGAATCCTGCAGAGCGACCATCGGCGGCAATGCTTCTTACACATGCCTTTGTACAAAATTTGCATGATCAAGATGTTTTGGTTCATTCACAAGGCTATCCCAGAGCTGACCGAGGACCAGAGGTTCATTTTCGCAGTCCTGACTGCAGTCCCAAAAAGGGCCGTGATGTAGCGCCACTGTCAGCCTCCATTGGCGCACGGATCATTAACAAAATTCATAATTTCTTTGGTATAGTACTGAAAAAGCTAGCCATACTCATTGTTAATCACTTCAGTTGGGGCCATTTTTACAATACTGCATCTTCTCCCGATGACAATCTGCCATGA 2001 0.4413 MSHQPNKQFSHSPLSHSDGSLRQTLQQRRLTRQRRLRYLTDQDAGVHSTSSLPASPLRSFNSGGSCSDHWSSSAIPQPLPLPETPLTHRPEPITPNSGYYANIGSPSFEHQAFAFSRKSVGYDSVKDFRSSSILGRSSFDAITANANYDLKVNIPATRVLAGNSSCKDPRELSHQSISNMKFHFAAKSAPTSILSSPVTSPRRASDVDLFDPSVDFHRDFNDILKVSPAKTVRSPDHSPLRSPRSHSPFLNTNTQDGSKQPKYCSRVWPENNHIDAHPLPLPPKPSSPAQSCTQHQSSIMMHHTAENSPSMKGQWQKRKLIGRGSFGSVYHGTNLETGASCAMKEVDLIPDDPKFADCIKQLEQEVRILRQLDHPNIVQYYGSEIVGDHLYIYMEYVHPGSINKFMHDHCGAMTESVVRNFTRHILTGLEYLHSMKTIHRDIKGPNLLVDASGTVKLADFGVAKILTEKSYELSLKGSPYWMAPELMMAAIKKESSPNLAMAIDIWSLGCTIIEMLTGKPPWSEFQGPQAMFKVLHKSPTIPENLSSEGQDFLRQCFKRNPAERPSAAMLLTHAFVQNLHDQDVLVHSQGYPRADRGPEVHFRSPDCSPKKGRDVAPLSASIGARIINKIHNFFGIVLKKLAILIVNHFSWGHFYNTASSPDDNLP 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0094 666 ProSitePatterns Protein kinases ATP-binding region signature. 321 344 IPR017441 GO:0005524
Lal17g0094 666 Pfam Protein kinase domain 316 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0094 666 MobiDBLite consensus disorder prediction 230 297 - -
Lal17g0094 666 MobiDBLite consensus disorder prediction 1 27 - -
Lal17g0094 666 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 11 621 - -
Lal17g0094 666 MobiDBLite consensus disorder prediction 244 261 - -
Lal17g0094 666 MobiDBLite consensus disorder prediction 68 87 - -
Lal17g0094 666 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 11 621 - -
Lal17g0094 666 SUPERFAMILY Protein kinase-like (PK-like) 293 592 IPR011009 -
Lal17g0094 666 SMART serkin_6 315 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0094 666 MobiDBLite consensus disorder prediction 1 31 - -
Lal17g0094 666 MobiDBLite consensus disorder prediction 43 60 - -
Lal17g0094 666 MobiDBLite consensus disorder prediction 41 60 - -
Lal17g0094 666 ProSiteProfiles Protein kinase domain profile. 315 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0094 666 Gene3D Transferase(Phosphotransferase) domain 1 312 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0094 Lal-Chr17 585149 589609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0094 29 578 MAP Kinase Kinase Kinase AT5G66850 45.861 3.07e-147 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lal17g0094 Pkinase 4.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0094 - - lang:109343923 933.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0094 17 585149 589609 Lal17g0094 17 585149 589609 ECH
Lal17g0094 17 585149 589609 Lal21g0178 21 1161547 1165672 LSH