LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal17g0089	ATGGCTTCATTTACTTCCGTATCTTCCCATTTTCTTCAGTTAGAATTCCCATCAAATAAAAAATACTGTAACCATCGCTCCTCCATTTACACATTCTCTGTTCCTCCATCTGAAATCAAAGCAGCTACTAGTTTTGAAACTCAATCGACTTCACAAGAGCTTCCGTTACGGAAAATCCCTGGAGATTATGGACTTCCCATTGTGGGTCCCATCAAAGATCGCCTTGACTATTTCTATAACCAAGGCCGTGATATCTTCTTCGCTTCCCGTGTTCAAAAATATAACTCCACCGTTTTCCGCGCCAACATGCCACCTGGCCCTTTTATTTCCAATGAATCAAACGTCATCGTTTTACTCGACGGTAAAAGCTTCCCCATTCTCTTCGACGTCGATAACGTCGAAAAGAGAGACCTTTTCACCGGAACTTTCATGCCTTCTACCGAACTCACCGGCGGTTACAGAATCCTCTCTTACCTCGACCCCTCCGAAGATAAACACGACAAACTCAAACGATTAATGTTCTTCCATCTCAGATCAAGAAGCAGCCACGTCATTCCAGAATTTCACTCAACCTACACAAAGCTCTTCGATACTTTGGAAAAAGAGCTTGCCGCTAACGGAAAAGTTAACTTCGGAGAGTTACATGATATAGCTGGATTTACATTTCTAACTAAATCTCTTTTTGGTACAAACCCTGAAGAGACGAAATTAGGAGTTAACGCTCCGAAAATCATAACGAAATGGATTCTATTTCAATTGAGTCCTGTTTTGAAAATAGGACTTCCACAAGTCATAGAAGATTCCATTTTCCACAGTTTCCGTCTCCCTCCTGCACTCATAAAGAAAGATTACCAGAAACTCTACGATTTCTTTTATGAATCCTCAGGTTTCCTTTTCGATGAAGCTATGCGTTTAGGTATTTCAAAAGAAGAAGCGTGCCACAATCTCTTATTCGCCACGTGTTTCAATTCCTTCGGTGGAATGAAGTTGTTTTTCCCCAACATCCTTAAATGGATTTCTCGTGCGGGTATTAATCTTCATGTTCAGTTAGCGGAGGAGATAAGATCCGCTGTTAAATCTAACGGTGGGAAAGTAACGATGGCGGTGTTGGAAAATATGCCATTGACGAAATCAGTGGTTTATGAAGTGTTGCGTATTGAGCCACCAGTACCGTTACAGTACGGAAAGGCGAAAAGGGATTTGTTGATTTCAAATCATGAAAACACATTTAAAGTGAAAGAAGGTGAGATGTTGTTTGGGTTTCAACCTTTTGCGACCAAAGATCCAAAAATATTTGAGAGGCCTGAAGAATTTGTTGGGGATAGATTTGTGGGTGATGGAGAAAAGTTGTTAAAGCATGTTCTATGGTCCAATGGGCCTGAAAATGAAGGCCCAACTCTTGCTAATAAGCAGTGTGCTGGCAAGGATTTTGTCACGTTGATTTCTAGGCTTTTGGTTGTTCAGTTGTTTCTTCGTTATGACACCTTTGGGATTCAAGTGGGAAAGTCTCCCATTGGTGTTTCTATTACTCTTACCTCTCTTAAGAAGGCCACCTTTTAA	1560	0.4103	MASFTSVSSHFLQLEFPSNKKYCNHRSSIYTFSVPPSEIKAATSFETQSTSQELPLRKIPGDYGLPIVGPIKDRLDYFYNQGRDIFFASRVQKYNSTVFRANMPPGPFISNESNVIVLLDGKSFPILFDVDNVEKRDLFTGTFMPSTELTGGYRILSYLDPSEDKHDKLKRLMFFHLRSRSSHVIPEFHSTYTKLFDTLEKELAANGKVNFGELHDIAGFTFLTKSLFGTNPEETKLGVNAPKIITKWILFQLSPVLKIGLPQVIEDSIFHSFRLPPALIKKDYQKLYDFFYESSGFLFDEAMRLGISKEEACHNLLFATCFNSFGGMKLFFPNILKWISRAGINLHVQLAEEIRSAVKSNGGKVTMAVLENMPLTKSVVYEVLRIEPPVPLQYGKAKRDLLISNHENTFKVKEGEMLFGFQPFATKDPKIFERPEEFVGDRFVGDGEKLLKHVLWSNGPENEGPTLANKQCAGKDFVTLISRLLVVQLFLRYDTFGIQVGKSPIGVSITLTSLKKATF	519

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal17g0089	519	PRINTS	E-class P450 group IV signature	373	389	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lal17g0089	519	PRINTS	E-class P450 group IV signature	426	444	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lal17g0089	519	PRINTS	E-class P450 group IV signature	472	490	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lal17g0089	519	PANTHER	ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE	39	517	-	-
	Lal17g0089	519	Pfam	Cytochrome P450	349	448	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lal17g0089	519	Gene3D	Cytochrome P450	50	519	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lal17g0089	519	PANTHER	CYTOCHROME P450 26	39	517	-	-
	Lal17g0089	519	SUPERFAMILY	Cytochrome P450	54	496	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal17g0089	Lal-Chr17	571877	573436	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal17g0089	26	519	Cytochrome P450	AT5G42650	62.675	0.0	651

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal17g0089	K01723		-	gmx:100807192	752.666

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal17g0089	17	571877	573436	Lal17g0089	17	571877	573436	ECH