Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0075 ATGTTACAATCTTCTATAGAACTCCCCGATTGTATCTATTATGCTAACCAACCCGTAACAATAACACCATGTACTCCAACACCAAACCATTCTCTTTATCTCTCAAACATTGACGACCAAAAGTTCCTGAGATTCTCCATTAAGTATTTCTACCTCTTCAAGAAATCAGTCAACTTTGAAATCTTGAAGTCTTCTCTGTCCAGAGTTCTAGTGGATTACTACCCTTTAGCTGGGAGGTTGAGAACAAGTTCTGTGCATGATCAGAAACTAGAAGTATATTGCAATGGAGAAGGTGCTTTATTTGCTGAGGCTTTCATGGATACCACTGTTGAAGAATTACTTGAATCTTCTAAGGTTCCAAATAAATCATGGAAGAGGTTCTTATATAAAGTGGACGCTCACACTTTCTTAGATGTTCCTCCTCTTGTAGTCCAGGTGACGAGTCTGCGGTGCGGGGGAATGATCCTGTGCACTGCGATCAACCACTGTCTATGCGACGGCATCGGCACTTCTCAGTTTCTACACGCTTGGGCAGAACTCACAACTGCTAAGTATTTGACCATCTTACCCTTCCACTCCCGACACGTCCTCAACCCCAGTCAACCCTCACAAGTAAAGTTCCGTCATCCAGCATACACCAGCACCACACCTAACCCAACCCCTCAAATTCAGCTCTTCAACTTCATACAGTCACAACCACTGGTCCCCACATCCTTCACCTTTCACCCAACCCATCTTCACTTTCTCAAGAAACACTGCGCAAATTGCACCACTTTCGAAGCCGTTGCGGCTCACACGTGGCGCTCTTGGGTTCAATCATTCCACCTAAGCTTGCCCCCTACCCTTGTTATGAAGCTACTTTTCTCCGTTAATATTCGGAGTAAAGTTAAGTTGCCAAAAGGGTATTATGGGAATGGGTTCTTGCTAGCGTGCGCTGAAAGCAGTGTAAGGGAATTGGTTGTGCCAAACCTGAATCATGCTGTGAAGTTAGTGCAGGAAGCAAAGGAAAAGATGAATGATAGTGAGTATATAAGGTCAATGATTGATTTGTTGGAGGATACAAGAGTAGAAACAGATTTATCTACTAGTTTGGTAATATCACAGTGGTCAAAAATGGGGTTGGAAGAGGTTGATTTTGGAGAGGGAAAACCTTTACATATGGGTCCTTTAACTAGTGATGTATACTGCTTGTTTTTACCGGCTATTGGTAATGCTAATTCGGTGAGGGTTCTTCTGTCAGTGCCCGAGAGCATGGTGGAAAGTTTTCACTATCATATGAACCAAAGCTGTGAAAATGACTCTGAGGAGGAAAATGGAGATGTTGTGAAGGTCACAAATGGGTTTCATTCGGAAGATAATGGATAA 1365 0.43 MLQSSIELPDCIYYANQPVTITPCTPTPNHSLYLSNIDDQKFLRFSIKYFYLFKKSVNFEILKSSLSRVLVDYYPLAGRLRTSSVHDQKLEVYCNGEGALFAEAFMDTTVEELLESSKVPNKSWKRFLYKVDAHTFLDVPPLVVQVTSLRCGGMILCTAINHCLCDGIGTSQFLHAWAELTTAKYLTILPFHSRHVLNPSQPSQVKFRHPAYTSTTPNPTPQIQLFNFIQSQPLVPTSFTFHPTHLHFLKKHCANCTTFEAVAAHTWRSWVQSFHLSLPPTLVMKLLFSVNIRSKVKLPKGYYGNGFLLACAESSVRELVVPNLNHAVKLVQEAKEKMNDSEYIRSMIDLLEDTRVETDLSTSLVISQWSKMGLEEVDFGEGKPLHMGPLTSDVYCLFLPAIGNANSVRVLLSVPESMVESFHYHMNQSCENDSEEENGDVVKVTNGFHSEDNG 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0075 454 Gene3D - 222 427 IPR023213 -
Lal17g0075 454 Gene3D - 15 214 IPR023213 -
Lal17g0075 454 SUPERFAMILY CoA-dependent acyltransferases 19 183 - -
Lal17g0075 454 PANTHER BNAC03G58010D PROTEIN 11 428 - -
Lal17g0075 454 Pfam Transferase family 20 427 - -
Lal17g0075 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0075 Lal-Chr17 464621 466657 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0075 21 422 Monolignol Biosynthesis Gene Families AT5G48930 29.493 9.70e-45 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0075 - - gmx:100810619 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0075 17 464621 466657 Lal17g0075 17 464621 466657 ECH