Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0069 ATGGCGCAAGAGATTCGCAAAAACGACGTCGGATTATCATCGAGTAGCAGTAGCAGACGATTATGGCCTTCTGTTCTCCGTTGGATTCCAACTTCCACCGATCACATCATCGCTTCCGAGAAGCGCCTTCTTTCTATTCTCAAGACTCCTTATGTTCAAGAACATGTTAATATAGGTTCTGGTCCTCCTGGTTCAAAAGTCAGATGGTTCCGATCATCGAGCAACAAGCCGCGGTTTATTAACACTGTTACATTTGACAGTAAAGATGATTCTCCCACACTTGTAATGGTTCATGGATATGGTGCTTCCCAGGGTTTCTTTTTTCGCAATTTTGATGCTCTTGCCAGTCGTTTCAGAGTTATTGCTGTTGACCAATTAGGTTGGGGTGGATCAAGCAGGCCTGATTTTACATGCAGAAGCACTGAAGAAACGGAGGAATGGTTCATTGATTCTTTTGAGGAGTGGAGAAAAGCCCAAAACCTGAGCAAATTTATACTACTTGGACATTCATTTGGTGGTTATGTTGCTGCCAAATATGCCCTCAAGCACCCTGAACATGTACAACACTTGATTTTGGTGGGATCTGCTGGATTTTCATCAGAATCAGATGCTAAATCTGAGTGGTTTACAAAGTTTCGAGCAACATGGAAAGGATCAGTTATGAACCATCTATGGGAATCTAATTTCACACCTCAAAAACTCGTCAGGGGTTTAGGTCCTTGGGGTCCTGATATTGTCCGCAAGTATACAAGTGCTAGGTTTGGTACACATTCAACAGGGGAGGTACTGACTGAAGAGGAATCAAGATTGCTAACAGATTATGTTTACCATACATTAGCGGCCAAAGCTAGTGGGGAGCTGTGCTTAAAGTATATATTTTCATTTGGAGCATTTACTAGGTCGCCTCTTGTTCGCAGTGCCTCGGAGTGGAAGGTGCCAACGACTTTCATATATGGTTTCCAAGATTGGATGAATTATGAAGGGGCCCAAGAAGCTCGCAAGCATATGAAGGTTCCATGTGAAATCATCAGGGTCCCCAAGGGTGGCCACTTTGTGTTCATTGACAATCCAACTGGCTTCCATTCTTCTGTGTTTTATGCTTGTAGAAGGTTTCTTACACCTGATCCAGACAATGAACCCCTTCCTGAAGGGCTAACCTTAGCTTAG 1167 0.4353 MAQEIRKNDVGLSSSSSSRRLWPSVLRWIPTSTDHIIASEKRLLSILKTPYVQEHVNIGSGPPGSKVRWFRSSSNKPRFINTVTFDSKDDSPTLVMVHGYGASQGFFFRNFDALASRFRVIAVDQLGWGGSSRPDFTCRSTEETEEWFIDSFEEWRKAQNLSKFILLGHSFGGYVAAKYALKHPEHVQHLILVGSAGFSSESDAKSEWFTKFRATWKGSVMNHLWESNFTPQKLVRGLGPWGPDIVRKYTSARFGTHSTGEVLTEEESRLLTDYVYHTLAAKASGELCLKYIFSFGAFTRSPLVRSASEWKVPTTFIYGFQDWMNYEGAQEARKHMKVPCEIIRVPKGGHFVFIDNPTGFHSSVFYACRRFLTPDPDNEPLPEGLTLA 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0069 388 SUPERFAMILY alpha/beta-Hydrolases 81 362 IPR029058 -
Lal17g0069 388 PRINTS Epoxide hydrolase signature 117 132 IPR000639 GO:0003824
Lal17g0069 388 PRINTS Epoxide hydrolase signature 180 193 IPR000639 GO:0003824
Lal17g0069 388 PRINTS Epoxide hydrolase signature 312 328 IPR000639 GO:0003824
Lal17g0069 388 PRINTS Epoxide hydrolase signature 345 367 IPR000639 GO:0003824
Lal17g0069 388 Gene3D alpha/beta hydrolase 78 368 IPR029058 -
Lal17g0069 388 PANTHER RE40534P-RELATED 14 375 - -
Lal17g0069 388 PANTHER BNAA01G13630D PROTEIN 14 375 - -
Lal17g0069 388 Pfam alpha/beta hydrolase fold 92 357 IPR000073 -
Lal17g0069 388 PRINTS Alpha/beta hydrolase fold signature 117 132 IPR000073 -
Lal17g0069 388 PRINTS Alpha/beta hydrolase fold signature 166 179 IPR000073 -
Lal17g0069 388 PRINTS Alpha/beta hydrolase fold signature 180 193 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0069 Lal-Chr17 412418 416935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0069 72 272 Acyl Lipid Metabolism Gene Families AT1G64670 28.019 2.38e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0069 - - gmx:100791981 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0069 17 412418 416935 Lal17g0069 17 412418 416935 ECH
Lal10g0872 10 16224646 16230304 Lal17g0069 17 412418 416935 PCT
Lal17g0069 17 412418 416935 Lal10g0872 10 16224646 16230304 PCT