Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0065 ATGGAAGGTATTGATCAAAGTGGAACATATCAAAGAAGTGGTAGTACATTTGGTTCACCACCAAAGCAGAAACCTGGTATACCACCTTCTCAGTCTGATATCAATATTCCTAAAACTTTAGGGTCACCTTCCCCTCCCCACATATTGGATTATCCAGAAGGGTCCTCACATTCAAGGTCTTTGTCTCAACCACCATTTCCTTCTCTTGATTCTTTGTCGACCCAACTCACTACTACTCCTACTGTAACCGGTAATATGGTTGTGGGAGAAAGTGTTGTTTCCACAACACATGTCCCTTCCCATTCCCCTTCGGTGTTCATCAACCGATGGCATGCTCTTCAGGTTGGTCATAATATTTCTCCTCATAAAGGACATAGACGTTCAATAAGTGACTCTCCTTTGAAAATCTCTGGTTTTATGCAATCTTCTTCTGCTTCTTCTCCTCCTCCTCCTGGAGAAGAAATGACAGATTTTCAGAAACCAGTTCAATTGGGCTTGAAGGGAGAAGTTAAGGATGGAAAAAATGTCGATGGTTATAGTGGTGAGCCTATGAGTAATGGGGAGAAGGAGAAAAAAGGTAAAACATCTTATCCTTTGAAAAATAAAGTTGATGAACATGCATCTAACATGGAACTCGAAAATGGTGATTTCAACACGGAGGAGTTGAAGAAAATAATGGAAAGTGATAAGAATGTTGAAATTGCCTTGACTGATCCCAAGCGTGAAAAAAGGCTTTTGGCTAATCGTCAATCAGCTGCTCGTTCAAGGGAGAGAAAAACAAGATACATTACTGAATTGGAGAACAAAGTGAAAACCTTTGAGATTGAGACAACAACATTGTCTGCTCAGTTTACCAATTTACAGAAAGATCATTCTGAGCTTAAAAGAGAGAACAACAAGTACAAATTAAGGCTTCAAGCAATAGAAAAACTATCTCAGTTGAAAGATGCTTTGAATCAAACATTGAATGATGAAGTCCAACGTTTGAGGCATGTTGTTGCAGAACTTGGCGGTGAACCCCATACTAGTTACATGGCTCGACAACTTGCTATTAACCAACAAATATTTCAGTTCCAACACCAAGAGTCCAACCAAGACATACATTTTCCACATACTCAAGAAGATAGACAATGA 1134 0.3942 MEGIDQSGTYQRSGSTFGSPPKQKPGIPPSQSDINIPKTLGSPSPPHILDYPEGSSHSRSLSQPPFPSLDSLSTQLTTTPTVTGNMVVGESVVSTTHVPSHSPSVFINRWHALQVGHNISPHKGHRRSISDSPLKISGFMQSSSASSPPPPGEEMTDFQKPVQLGLKGEVKDGKNVDGYSGEPMSNGEKEKKGKTSYPLKNKVDEHASNMELENGDFNTEELKKIMESDKNVEIALTDPKREKRLLANRQSAARSRERKTRYITELENKVKTFEIETTTLSAQFTNLQKDHSELKRENNKYKLRLQAIEKLSQLKDALNQTLNDEVQRLRHVVAELGGEPHTSYMARQLAINQQIFQFQHQESNQDIHFPHTQEDRQ 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0065 377 SMART brlzneu 236 300 IPR004827 GO:0003700|GO:0006355
Lal17g0065 377 MobiDBLite consensus disorder prediction 1 20 - -
Lal17g0065 377 Coils Coil 284 339 - -
Lal17g0065 377 MobiDBLite consensus disorder prediction 55 76 - -
Lal17g0065 377 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 243 258 IPR004827 GO:0003700|GO:0006355
Lal17g0065 377 PANTHER BZIP TRANSCRIPTION FACTOR 47 191 - -
Lal17g0065 377 PANTHER BZIP TRANSCRIPTION FACTOR 208 373 - -
Lal17g0065 377 CDD bZIP_plant_RF2 241 291 IPR044759 GO:0003700|GO:0006355
Lal17g0065 377 Gene3D - 240 293 - -
Lal17g0065 377 SUPERFAMILY Leucine zipper domain 240 295 IPR046347 GO:0003700|GO:0006355
Lal17g0065 377 MobiDBLite consensus disorder prediction 134 150 - -
Lal17g0065 377 MobiDBLite consensus disorder prediction 119 195 - -
Lal17g0065 377 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 238 301 IPR004827 GO:0003700|GO:0006355
Lal17g0065 377 Pfam bZIP transcription factor 240 298 IPR004827 GO:0003700|GO:0006355
Lal17g0065 377 MobiDBLite consensus disorder prediction 1 76 - -
Lal17g0065 377 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 208 373 - -
Lal17g0065 377 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 47 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0065 Lal-Chr17 382195 384402 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0065 115 357 bZIP Transcription Factor Family AT4G38900 40.574 4.92e-45 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal17g0065 bZIP_1 1.7e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0065 - - lang:109327772 557.37