Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0063 ATGGTGTCATGCTTCAAACTACTCACTTGCGGCGGTGGCGCGTCGGAGAAAGATCATTCCGAGGTGAAGAATTCCAATGATAAAAGTGGTTGGAGTTTCGGGAAAAAATCTGCAAGGCACCGTGTGCTTAGCAACACTGTGATAACAGAGGCCCCCTCTTCTGCAAATAAGCAGAGTACAGAGTGCGATAGTTTTAACTTTCAACCACTTCCTGAACCTAATGTTCTTGAGAAGATTTACACAACACATTCTTCTGATGAGAAGCCTCAGTTATACTCACTGGAAAGCTCACAAATCTCAGAGTCTTCTATTATCATCGTCCAGGCTGCCATCAGAGGGTTATTGGCTCAGAGAGACCTGCTACAGCGTAAAAATGTAGTGAAGTTACAAGCTGCTGTTCGTGGGCACTTGGTCCGGAAGCATGCTGTAGGAACCCTGCGTTGTGTTCAAGCCATCATTAAAATGCAGCTCCTTGTGCGAGCTCGTCGTGCTCAGCAGTCACGTCTAGAAGAAAATTTATATCACATAGATGACATCAATGATTCCACAGAAAAAATGGAGAATGAAAATCACATGAACAAATCTAATGTGAAGTACACTTCCATTGAGAGGCTTCTTAGCAATAGGTTTGCTCGTCAGCTGTTGGAAACAACACCAAAGAGGAAACATATCCATGTCAAGTGCAGTCCTTCCAGAAATGACTCTGCTTGGAAATGGTTGGAGAGATGGGTGTCTGTATCATCAAAAGATACTGCTGAGTACAAAAAGTCAAGTTCTCTGACAGATCAATTGGACAAAACCAACGGTCGTACTTCTGTTTTTCAATTTGAAACATGCATTCCATCTGAAGTTTTTCTCCAGTCAACTGACTCAAAGCCCTCTGTTGAGGATTCCCTGTCGCCTTCTGGTGATGAAGTGAAGCTGACTAGTTATGATGCAAATAACTCAGGCTTTCAAGGAAGCTGCTCTACTGCATCTCTTGTGAAGGATGACTTGGAACAAGTTCATCTTGAAAAGTCAAATCCATATGATGATTATGTAAAATCTGCTGAAATTGATATCTTCCAAAATGAAAATTCGGCATCAGACTCAACTGCTCCACCAGAGCTTAATACTCTTCCTGAAATAGATGGTGAGCAGCACAAACTATCTATGAAAACATTTGCCTCAGACCAACTAGAAGCTGAAGGAAATAAATCTGTGCATGGATGTAGAAAGGTCAGTAATCCTGCATTGATGGCTGCACAGTCAAAATTTGAAGAGCTTAATTCAATGACAAATTCAGGTAGGACAAGCATTTTGTCCAATCAAGAGGCAACTGTTGAATCACAAGTGGACATCTCTTCTGTCGGCACAGACACTGCATATCGATCGAAAGAGTTCCCATCAGTGAATCCCTTTCACTATCTTTCAAGGGTTGGGGATTCTGAATGTGGTACTGAACTCTCTATTTCTTCCACTCTGGATTCACCTGATGTATCAGAGGCTGGTGCTGTAGAAAATGAGCGATATGCCGAAGATGTAGAAGGGATTGGTAATCTTGAGAACACAATAAATTATGGTGTTGAGGCTAATGTTCCATGTATCTTTCCTACTTCAAGCTTAGCTACCTCTGTTTTGGATCAGACACAGATTCTTGATGGCATTAGTGGCAATATGGTTCACTCGGTGGTAGCCATGGACTCTGAAGAGCCTTCTATTAGGGCTGAGAAAAATTCACCTGACCTGAAGAGAGAGCTGGTAGAGGCTGCTCAGCAAGATTTCAGACCATCTCCAGAAGAAGCTTCACCTAGTAGCTATATTACTGTCCCTGAATCACAAGGAACACCTTCAAGTCAGGTATCTATCAAACCTAAAGAAAGCAAAATTGATAAGACTGGATCAAGCAAGAAACGTAGGACCCTGTCAGTGGGTAACAAATCACCTGCAAATTCAAATCACGAGACAGGCTCAAGAGGTAGTAGGGAGAAACTGCCTAAAGATCAGCAGAGTGGAAAGAGACGTAGTTCCATTGGCTTAGTAAAACCTGATCACGTCGATCAAGAACCAAGTGATAATATTAGTAACCATAATTCACTTCCCCGTTTTATGCAAGTTACAGAATCTGCTAAGGCCAAGATCAATGCAAATAGCTCTCCAAGATCAAGTCCTTACATGCATGAAGAAGACATCCAACTTAAGAAAAGACATTCCTTACCTGGTGCCACTGGTAGGCAGGTTTCTCCACGCATCCAACAATCAATGTCTCAAGCGCAACAGAATGCAAAAGGGAGTAGTGTACATTCTCCACAAGCAGTATAA 2301 0.4229 MVSCFKLLTCGGGASEKDHSEVKNSNDKSGWSFGKKSARHRVLSNTVITEAPSSANKQSTECDSFNFQPLPEPNVLEKIYTTHSSDEKPQLYSLESSQISESSIIIVQAAIRGLLAQRDLLQRKNVVKLQAAVRGHLVRKHAVGTLRCVQAIIKMQLLVRARRAQQSRLEENLYHIDDINDSTEKMENENHMNKSNVKYTSIERLLSNRFARQLLETTPKRKHIHVKCSPSRNDSAWKWLERWVSVSSKDTAEYKKSSSLTDQLDKTNGRTSVFQFETCIPSEVFLQSTDSKPSVEDSLSPSGDEVKLTSYDANNSGFQGSCSTASLVKDDLEQVHLEKSNPYDDYVKSAEIDIFQNENSASDSTAPPELNTLPEIDGEQHKLSMKTFASDQLEAEGNKSVHGCRKVSNPALMAAQSKFEELNSMTNSGRTSILSNQEATVESQVDISSVGTDTAYRSKEFPSVNPFHYLSRVGDSECGTELSISSTLDSPDVSEAGAVENERYAEDVEGIGNLENTINYGVEANVPCIFPTSSLATSVLDQTQILDGISGNMVHSVVAMDSEEPSIRAEKNSPDLKRELVEAAQQDFRPSPEEASPSSYITVPESQGTPSSQVSIKPKESKIDKTGSSKKRRTLSVGNKSPANSNHETGSRGSREKLPKDQQSGKRRSSIGLVKPDHVDQEPSDNISNHNSLPRFMQVTESAKAKINANSSPRSSPYMHEEDIQLKKRHSLPGATGRQVSPRIQQSMSQAQQNAKGSSVHSPQAV 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0063 766 MobiDBLite consensus disorder prediction 591 617 - -
Lal17g0063 766 SMART iq_5 122 143 IPR000048 GO:0005515
Lal17g0063 766 SMART iq_5 99 121 IPR000048 GO:0005515
Lal17g0063 766 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 168 IPR027417 -
Lal17g0063 766 PANTHER PROTEIN IQ-DOMAIN 32 5 759 - -
Lal17g0063 766 Pfam IQ calmodulin-binding motif 123 141 IPR000048 GO:0005515
Lal17g0063 766 Pfam IQ calmodulin-binding motif 102 119 IPR000048 GO:0005515
Lal17g0063 766 ProSiteProfiles IQ motif profile. 100 128 IPR000048 GO:0005515
Lal17g0063 766 PANTHER IQ-DOMAIN 5-RELATED 5 759 - -
Lal17g0063 766 MobiDBLite consensus disorder prediction 650 664 - -
Lal17g0063 766 MobiDBLite consensus disorder prediction 585 766 - -
Lal17g0063 766 MobiDBLite consensus disorder prediction 685 718 - -
Lal17g0063 766 Gene3D - 100 147 - -
Lal17g0063 766 MobiDBLite consensus disorder prediction 738 766 - -
Lal17g0063 766 Pfam Protein of unknown function (DUF4005) 682 753 IPR025064 -
Lal17g0063 766 MobiDBLite consensus disorder prediction 632 649 - -
Lal17g0063 766 ProSiteProfiles IQ motif profile. 122 151 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0063 Lal-Chr17 367222 372757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0063 98 756 IQD Protein Family AT1G19870 34.593 1.03e-92 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0063 - - gmx:100799424 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0063 17 367222 372757 Lal17g0063 17 367222 372757 ECH
Lal17g0063 17 367222 372757 Lal4g0076 4 442868 452308 LSH