Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0058 ATGACTCTCGAAGATTTCTTTACCTTGAGTGAATTGAAAGATGGGCTCACAGCCCCTTATCGAGTGCAGGAGTTTGTTTCTGTAATGCAGAAGGAGAAAGACTGTGTGGTTAAAAATGCTGGTGATGCTACAAGGCAGTGGGCTGCAGTTGCAAGCACTATTGCTGCTACAGAGAATAAAGATTGTCTTAATCTTTTTATTCAATTAGGTGGACTTTGGTTCATCAATAGATGGTTAAAAGACGCTCAAGATTTTGCTATTGATGCCAATGACAGATTTATTGACGAATCGATCACTGGAATGTTACAAGCAGTTGAACAGCTGCACCTTGATAGTCAGATGTCAGTTTCATCTGGAATTCATGCAACTGTAAGTAATCTACTTGACCACCATAGCTCTAGGGTTCAGAATAAAGCAAGACTATTGGTTGACAGCTGGAAAGGAAGTGGAAATGGTGATGCTGAATCTCATGATATTGCTGAAGTCAACAATGCAAGTAGCAAGTTTGTCAGGGAGGAAGGCCAGCCATCTTCTGTAACTGAAGCTGGCAATAATAGTGATCATACATCAGGACTTGTTGGGTGTGAGAAATCTCTATTTAGAAGCCCCGATAATTCACTACCAGAAAGGATTGCCAGTGTTCAGATACAGAGTTCTGGCAATGCAAGTTTAGAATGTGAAGAAATCAAAGAGAGATCACTAAGCTATCTTGCTAGTGTTTCGTCTTCTGCCCAAAAATTTGTTTCTGTACATGAAGGAATACCGTTATGTGCTCCAAGTGAGAATGCTTTGGTTGGAACCTGTAACCTACTTGTTCCAAAGCAAGACAATGTTGAAGGACAATCAGGTGTTGTACAGTTAACTGACTTTGCCAAAATGGAGTATCAGGAACAAAATGTTAATGGCCCTCCAGAAAAATTAGATGCACCAGAGATCTGTTTGGTGTCCACCAAGCTAGAGCCGGAACCTATTTCCCTCGGTGCTAGTGAATCAAAAGCACTAGAACCTGTGAAAGAACCAACTTTGGAGCATAATGGTGAAAATGATGAGCTTGGTGTTTGTCATAAAATAGTCACTTCTGTTGGTGTGAGGTCACCTGTGTCTGGTAGAAAGAACAGGGTGGATCATATCATAGCTGTATCTAAAGCTTCAGATAATAATGATGACTGCCATTCTAATGTGTTGTGGGAGTCATCAGTCAGTGAAAGTGAGTTGGGAAAGACTGAGGTGTTAGAGATGTCCATCTCTGGAACAGAATATGTCAGAGCAGTGAAGGAAGGCAAGGGCCATGTATCTAGTGAAGGTGAGAATACCTCAAATGGTTCTGATTTTAATAAACCTGGAAAAGGTTCCAGAAGCCCTAGCATAATTGACAAGAAAAGTTCTGCTGATGAATTTGACAATGGCACTGTTGATGCTATAGAAGTCACTCGGCAAATTGCTCTGGAAATTGAAAGACAAGTCTGCAGTTCTTCTGAGAAAATCACTGAAGATGGAATCAGGCAACCAGGCAGCCCAGGCTCTGTTAAAAAAGAGGATGAACCCAGTCTTGTGCCATCCAAGGAAGTGTCATCCCGAGAAAGCCACTCTACCGGGGCATGTTCTGATGAGGAGCAGTGTTTAAGTATTTCAAACAATATTGTGGCTGAACCGGAATGCAGACCTAACAAGGAGTCCATGCAAGTGTGTGAAGCAGCTCAAGATTCTGGAGGTAATTCAGAGAAACGTCTCTGTTTGTTTGATCTTAATGAAGACGGTTCTGATGATATGGATGTTTCTGTAAATGCTATATCTACTCCAATACCTGCTGTCTCTGCTTCTACGCCTACACCAAATTCTGGGCTGCCTGGGGCCCCTTTGCAGTTTGAGGGGACACTTGGATGGAAAGGGTCAGCTGGAACCAGTGCCTTTGGTCTTGCATCACCCCGCAACAGTGAGAGGAATCTTGATTTTGATCTAAATGTAGCTGAGGGTGATGAAGGATTGGCAAAACAAATTGCCAAATCTTCGTTCCTTGCTTCTGGCCCATTACTAGTTGAATCTAGTCCTAAAAGATCAAGCAGGCTCGAGCTGGATCTGAACAGTCTTGGCGATGATTGTGATGGCCAACCTTCAGATCAGAGGATGGAGGGACAATTTTTCCTTGGAAGAAATGGCTATTGGAGCCCATCACCTGCATCATCAACATCATCGATGCAGCCTTCCGTTAGAAACCTTGATTTGAATGACAGGCCATGCCTTCAAACTGATTTAATTGACCAGGGCACAGGTAACTCTCCTCATTTTATCGATGCATTCGGGCTTTGTAAATCAGATGCCCCTGCTATCTCTATTTTTGGTACCAAAGTTGATATTGGTAGAAGAAGAGAGTATGTTCCTCAAACTTCGTTTATACCAAATGGCAAGGCTATTGAACCTGCAATAGATCTTACAATGTCAAGAGCAGGTGGCATTTTTGGAATGCCACCCACAGCATTCTACAATCTTTCAAGTGTTCTTGGGTATAATGGAGTAGCATCTGCATCAGCACCCCCTTTGTCTTTTTCATCAGCCATGTATGGGTCAGGTGGCACAATTCCATACATGGTGGACTCAAGAGGAGCTCCACTTGTCCCTCAAGTCGCTGCAGGATCTTTGTCAACTGTCCTTCCGTCTTATTCTCAGCCACCGTTCATCATGAACATGACTGCTACACAACTTGCTTTAAATGGAGTTGGACCGTCACACCCTCCTAACCTTGATCTAAACTCTGGCTTCATGATTGAGGGTGGTGGGAATAGAGATGCCTTGACAACAAGACAATTTTTCTTTCCTGGTCAAGGCACCATGCCACGACCCTCAAGTTCCGGGGTTGGTGGGAAAAGAAAGGAACCAGACAGTGGTTGGGAATCCTACCCTTTTAACTACAAGCATCCACAACCTCCATGGAAGTAG 2934 0.4332 MTLEDFFTLSELKDGLTAPYRVQEFVSVMQKEKDCVVKNAGDATRQWAAVASTIAATENKDCLNLFIQLGGLWFINRWLKDAQDFAIDANDRFIDESITGMLQAVEQLHLDSQMSVSSGIHATVSNLLDHHSSRVQNKARLLVDSWKGSGNGDAESHDIAEVNNASSKFVREEGQPSSVTEAGNNSDHTSGLVGCEKSLFRSPDNSLPERIASVQIQSSGNASLECEEIKERSLSYLASVSSSAQKFVSVHEGIPLCAPSENALVGTCNLLVPKQDNVEGQSGVVQLTDFAKMEYQEQNVNGPPEKLDAPEICLVSTKLEPEPISLGASESKALEPVKEPTLEHNGENDELGVCHKIVTSVGVRSPVSGRKNRVDHIIAVSKASDNNDDCHSNVLWESSVSESELGKTEVLEMSISGTEYVRAVKEGKGHVSSEGENTSNGSDFNKPGKGSRSPSIIDKKSSADEFDNGTVDAIEVTRQIALEIERQVCSSSEKITEDGIRQPGSPGSVKKEDEPSLVPSKEVSSRESHSTGACSDEEQCLSISNNIVAEPECRPNKESMQVCEAAQDSGGNSEKRLCLFDLNEDGSDDMDVSVNAISTPIPAVSASTPTPNSGLPGAPLQFEGTLGWKGSAGTSAFGLASPRNSERNLDFDLNVAEGDEGLAKQIAKSSFLASGPLLVESSPKRSSRLELDLNSLGDDCDGQPSDQRMEGQFFLGRNGYWSPSPASSTSSMQPSVRNLDLNDRPCLQTDLIDQGTGNSPHFIDAFGLCKSDAPAISIFGTKVDIGRRREYVPQTSFIPNGKAIEPAIDLTMSRAGGIFGMPPTAFYNLSSVLGYNGVASASAPPLSFSSAMYGSGGTIPYMVDSRGAPLVPQVAAGSLSTVLPSYSQPPFIMNMTATQLALNGVGPSHPPNLDLNSGFMIEGGGNRDALTTRQFFFPGQGTMPRPSSSGVGGKRKEPDSGWESYPFNYKHPQPPWK 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0058 977 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN 1 977 - -
Lal17g0058 977 MobiDBLite consensus disorder prediction 936 977 - -
Lal17g0058 977 MobiDBLite consensus disorder prediction 491 536 - -
Lal17g0058 977 MobiDBLite consensus disorder prediction 426 464 - -
Lal17g0058 977 MobiDBLite consensus disorder prediction 433 449 - -
Lal17g0058 977 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 21 149 IPR035441 -
Lal17g0058 977 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 1 977 - -
Lal17g0058 977 MobiDBLite consensus disorder prediction 169 190 - -
Lal17g0058 977 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 61 153 IPR035441 -
Lal17g0058 977 MobiDBLite consensus disorder prediction 521 536 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lal17g0058 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0058 - - gmx:102664074 1199.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0058 17 338649 341582 Lal17g0058 17 338649 341582 ECH