Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0055 ATGAAAAAAACCAAAGTTGCAGTGGAAATTCTGACATACATGGCCAACCCTAAAGGATACCAGATCTTAATTTTCAAATACAATAACTACCCAAAAACTGAAGCCTTTATGGGTCCCTTAATGAAGCTACGTTCTCCTCTAGCTTTTTGTTCTTCAATGCTGCTTTGTTTCATAGTATTGTTACTTGTTTGTTGCAAAATAAAGGGTGTGGTGGAACTTCCACCAAATGTTTCGGTTCCCGCAGTGATAGTGTTTGGAGATTCAATCATGGATACAGGTAACAATAACAACAACATGCAAACGTGGGCAAGGTGCAACTTTGCTCCTTATGGAAAAGATTTCCCAGCTGGGATTCCAACTGGTCGTTTTAGTAATGGAAAGGTTCCTTCAGATCTTATAGTTGAAGAATTGGGCATTAAGGAACTACTGCCAGCATATTTGGATCCAAATCTCCAACCTAAAGATCTTATCACTGGTGTTTGCTTTGCATCTGGTGGCTCTGGCTACGATCCCCTCACATCCAAAATATCGACAGCTATTACGTTGCCCGATCAAATAAACATGTTCAAAAAATACTTAGAGAAGCTAAAAGGTATCGTTGGAGAAGATAGAACCAAATTCATCGTAGCCAATAGTGTTTTTCTTCTAGTACAAGGCAGCAATGACATTTATAACACATATTTTTTGAGTCACGCTAGACAACTGCAATATGATCTTCCTACTTACACTCGCCTTTTGGTCACCTCAGCTTCTAATTTTTTAAAGGAAATATATGAACTAGGTGCTCGGAGGGTTGGAGTATTTGGTGCGCCACCAATTGGATGTGTGCCATTTGTGAGAACAGTGCTTGGAGGAATAGTTAGAGAATGTGTAGAAAATCAGAATGAAGCTTGCAAGTTATTTAACAATCAACTATCAGAGGAGTTAGATTCCCTTAACCAGAACTTGCCCAATAGTAGAATGGTGTACCTTGATGTTTACAACCCTCTACTTGATATCATTCAAAATTATCAACAATATGGTTATAAAGTTGAAGACAGAGGATGCTGTGGCACAGGGGAATTAGAGGCAGCAGTTATATGCAACCCTTTGGCTCCACCATGTCCAGATGTTGAGGATTATATATTCTGGGATAGTTTTCATCCTTCAGAAAGTGCTTACAAAAAGCTTGTAGCTTCTCTTCTCCGAAAACATTTGTACCAATTCTTTTGA 1212 0.3886 MKKTKVAVEILTYMANPKGYQILIFKYNNYPKTEAFMGPLMKLRSPLAFCSSMLLCFIVLLLVCCKIKGVVELPPNVSVPAVIVFGDSIMDTGNNNNNMQTWARCNFAPYGKDFPAGIPTGRFSNGKVPSDLIVEELGIKELLPAYLDPNLQPKDLITGVCFASGGSGYDPLTSKISTAITLPDQINMFKKYLEKLKGIVGEDRTKFIVANSVFLLVQGSNDIYNTYFLSHARQLQYDLPTYTRLLVTSASNFLKEIYELGARRVGVFGAPPIGCVPFVRTVLGGIVRECVENQNEACKLFNNQLSEELDSLNQNLPNSRMVYLDVYNPLLDIIQNYQQYGYKVEDRGCCGTGELEAAVICNPLAPPCPDVEDYIFWDSFHPSESAYKKLVASLLRKHLYQFF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0055 403 CDD SGNH_plant_lipase_like 80 397 IPR035669 -
Lal17g0055 403 SUPERFAMILY SGNH hydrolase 213 394 - -
Lal17g0055 403 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 53 401 - -
Lal17g0055 403 Pfam GDSL-like Lipase/Acylhydrolase 82 390 IPR001087 GO:0016788
Lal17g0055 403 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 82 93 IPR008265 GO:0006629|GO:0016298
Lal17g0055 403 PANTHER GDSL ESTERASE/LIPASE EXL3 53 401 - -
Lal17g0055 403 Gene3D SGNH hydrolase 74 399 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0055 Lal-Chr17 323590 325401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0055 76 396 Pollen Coat Proteome AT1G75910 42.901 2.28e-85 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0055 - - gmx:100793604 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0055 17 323590 325401 Lal17g0055 17 323590 325401 ECH