Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0039 ATGCTACTTGGAATTGTAGCATATTTTCTTAGTGGTCGTTCAAAGGTCTCCCTCACATCCAAGTTGGTTAATGACATTTATTTTGTTATAGTTACCCTCACTAGTGTGGGATATGGAGATATTGTTCCACACACAACGATTGCCAAAATCATGATTAGTCTTTATATTTTAGTTGGTTTTTGGATGTGGGGAATATTGATCAATCATTTAATGGACGATGAATTAGAACAACTAAGAACCCGTTTGGTGAAATGGTGTGATAATTCTCCTTATAAAAATTTCAACAACCACAAAGTGATGATATATCTAACTATTGGAGTTATATTTTGCTTTATTATTATTGGAGCATTCAGATCATACTTTTTAGAGACTATGAGTGTGATTGATAGTTTTTACTTGTCAGTTGTATCAATTTCTACGGTGGATTATGAAGACTATAGCTTTGATGGAAGAATAATTAATGGGAATCCTCACAAATTATCAAGAGACCATAGTTTTGTCATAGATGAACTTATTAAAATGAAGGTGATACATGAACAGAACAAGATGAATATAATACAAACATTGGAAAATACGAAGGAAGCATGTTTGAGGGAACAAACGGAATCAAGTTTGATGGAAACACATAGCTCCTATATCCCAATAATAGTATTCCTCTATTCTTAG 666 0.3258 MLLGIVAYFLSGRSKVSLTSKLVNDIYFVIVTLTSVGYGDIVPHTTIAKIMISLYILVGFWMWGILINHLMDDELEQLRTRLVKWCDNSPYKNFNNHKVMIYLTIGVIFCFIIIGAFRSYFLETMSVIDSFYLSVVSISTVDYEDYSFDGRIINGNPHKLSRDHSFVIDELIKMKVIHEQNKMNIIQTLENTKEACLREQTESSLMETHSSYIPIIVFLYS 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0039 221 Pfam Ion channel 3 70 IPR013099 -
Lal17g0039 221 SUPERFAMILY Voltage-gated potassium channels 5 72 - -
Lal17g0039 221 Gene3D - 91 167 - -
Lal17g0039 221 PANTHER OS01G0696100 PROTEIN 2 149 - -
Lal17g0039 221 SUPERFAMILY Voltage-gated potassium channels 97 148 - -
Lal17g0039 221 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 2 149 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lal17g0039 221 Gene3D - 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0039 Lal-Chr17 244351 245749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0039 3 148 Ion Channels AT4G18160 30.488 2.00e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0039 K05389 - cit:102629027 106.301