Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal17g0031 | ATGACTCGTCCTTTTAGATTTTTAACCGATGACCACTTCTCGTCTCATTCCTCCGCCACCGCCATCAGATCCGACTACGTCATCATCATCGCTGCCCTCACCTGCGCTTTCATCTGCCTCCTCGGCCTCGTCGCTGTTTCTCGCTGCGCCTGTCTCCGCCGCCTTCATATTTCCTCCACTGCCGCCGCTCCTCAATTTCCTCCTATCCACGCTGACGCCAACAGAGGCGTCAAGAAGAAGGTCCTCCGCTCTCTCCCCAAGCTCACCGCCACCGCTGAATTCGTCCTCAAATTATCCGATTGCGCTATCTGCCTGAGCGAGTTTGCCGCCGGTGAGGAATTTCGAGTGTTGCCTCAGTGTGGTCATGTGTTCCACGTAAGCTGCATCGACACGTGGCTCAAATCACATTCTTCGTGCCCGTCGTGCCGTCAGATTATGGTTGTTTCACGATGCCAGAAGTGCGGTGGTATCCCGGCCTCTGTCAGCTCCGGCTCGACCTCCGCCGCCGTATCGGAAACAGATCCAGATGCGAGATCAAAGATTAGCGAAAAAGAAAGCGATGCTAATAGGTTCTTGGCTTAG | 582 | 0.5481 | MTRPFRFLTDDHFSSHSSATAIRSDYVIIIAALTCAFICLLGLVAVSRCACLRRLHISSTAAAPQFPPIHADANRGVKKKVLRSLPKLTATAEFVLKLSDCAICLSEFAAGEEFRVLPQCGHVFHVSCIDTWLKSHSSCPSCRQIMVVSRCQKCGGIPASVSSGSTSAAVSETDPDARSKISEKESDANRFLA | 193 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal17g0031 | 193 | MobiDBLite | consensus disorder prediction | 176 | 193 | - | - | |
Lal17g0031 | 193 | MobiDBLite | consensus disorder prediction | 159 | 173 | - | - | |
Lal17g0031 | 193 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 1 | 180 | - | - | |
Lal17g0031 | 193 | Pfam | Ring finger domain | 100 | 143 | IPR001841 | - | |
Lal17g0031 | 193 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 67 | 147 | IPR013083 | - | |
Lal17g0031 | 193 | MobiDBLite | consensus disorder prediction | 159 | 193 | - | - | |
Lal17g0031 | 193 | CDD | RING-H2_PA-TM-RING | 100 | 143 | - | - | |
Lal17g0031 | 193 | ProSiteProfiles | Zinc finger RING-type profile. | 101 | 143 | IPR001841 | - | |
Lal17g0031 | 193 | PANTHER | RING-H2 FINGER PROTEIN ATL8 | 1 | 180 | - | - | |
Lal17g0031 | 193 | SUPERFAMILY | RING/U-box | 82 | 149 | - | - | |
Lal17g0031 | 193 | SMART | ring_2 | 101 | 142 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal17g0031 | Lal-Chr17 | 178091 | 178672 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal17g0031 | 5 | 192 | C3H Transcription Factor Family | AT1G20823 | 55.276 | 3.02e-58 | 179 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal17g0031 | - | - | lang:109328101 | 329.331 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal17g0031 | 17 | 178091 | 178672 | Lal17g0031 | 17 | 178091 | 178672 | ECH |