Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0019 ATGTCTGTCATCACTATGTCCCAACTCACTGACCTACAACCCAAACTTGGTCATGAAAGTGAACATTCTGAGGATGAAAAGAAGAAAAGGGTGGGGTCATTTAAGAAGGTGGCTATCAGTGCCTCGAGTAAATTCAAGCATTCCTTTGCAAAGAAGACACGGAGACACAGCAGGGTCATGTCTGTTTCAATTGAGGATGAAATTGATACAGAAGAGTTGATGGCAGTTGATGCTTTTCGCCAAGTGCTTATCTTGGAAGAGCTATTGCCCTCTAAACATGATGATCATCATATGATGCTAAGATTCTTGAAAGCTAGGAAGTTTGACATTGAGAAAACAAAACAAATGTGGTCAGATATGCTTAAGTGGAGGAATGAATTTGGTGCTGATACTATCATGGAGGATTTTGAATTCAATGAAATAGATGAAGTTCTTAAATATTATCCACAAGGGCATCATGGAGTTGATAAGGATGGAAGACCTGTTTACATTGAAAAATTGGGCCAGGTTGACTCTAACAAGCTGTTACAAGTAACAACTATGGAACGTTATCTCAAGTACCATGTTAGGGAGTTTGAGAGGACATTCAATGTTAAGTTGCCTGCATGTTCAATCGCGGCAAAGAAACACATTGACCAAAGCACAACTATTTTGGATGTGCAAGGAGTGGGTCTTAAAAGCATGAACAAAACTGCAAGGGATCTCCTCCAACGACTTCAGAAGATTGATGGTGATAACTATCCTGAGTCCCTTAACCGCATGTTCATCATCAATGCTGGCTCTGGATTTAGGCTATTGTGGAATACTGTAAAGTCATTCCTTGATCCCAAGACCACTTCAAAGATCCATGTCCTAGGTAACAAATACCAGAGCAAGTTGCTTGAAATCATTGATGCCAGTGAACTTCCAGAGTTCTTGGGTGGTACTTGCACTTGTGCAGATAAAGGTGGTTGTATGCTTTCTAACAAGGGACCCTGGGATGACCCAGAGATCTTGAAGATGGTTCAAAATGGCAAGGGAAAAGCCAAGAGAAAAAGCTTATCCGAGCTTAACGAAAAAACAATCACAGAAGATGAAGCAGCACACCAAAAGGGATGCAAAGAATCAGTTCCAGAGGCACATGATGTGCAATGTTTATCATTAAATGTGGAGCAACCTACATCCTTTACTGTGCCAGGAGCAAAGCAATGTGGTGTTTATCAGTATGACGCCTTTGTTGACAAGTCAGTGGATTCATCTTGGAATAAATCAGTACAAAATGATAAATATGCACTTTCTCAAGGCTATGTCCCTAGCAATACATGTGATGGATTTAGCAAACAATTAGTTGGTGGAATAATGAGTATTGTTATGGGAGTTGTAAGTATGATCCGCATGACAAGGAACATGCCAAGGAAAATAACAGAAGCAGCAGTGTATGGAAGCTCAGTAATTTATAATGAGAATATGCTGAAAGCACCTCATAGCATTACAAACAATGATCACATGAGGATGATGAAGCGCATGGGTGAACTAGAAGAGAAAGTGGCTGTTCTCAGCATGAGACCTGCCATGCCACCTGAAAAGGAGGAAATGCTGAATAATGCTCTATGCAAAGTCAGTGCTCTAGAACAACATTTGGCTGCAACCAAAAAGGCACTTGAAGATGCCCTTGTTCGACAAGTGGAGCTCCAAGAGCAAATTGAGAAGAAAAAGAAGAAGAAGAATAAGTTGGTATGTCATACTCATACATGCCTTGCATTTCTTTCGGGTGCCACTGGTAAGGTGTTATTGCTGTGTGACTCTATTCTCTTTACTAGTGTAGTGTGTCTGGGTCCTGCCACCTTAACAAATTCTCCATCTTTTCTTGTTAATTACTCTACCCTCTCTCTCAATATGGCTTCTCGAAGTGGAACATCTTCAGGGTCTTCTATGCTTCTTCAAAACTCAGGTTCTGAAGAGGACTTGCAGGTTTTGATGGATCAGAGGAAGAGGAAGAGAATGATATCTAACCGCGAATCTGCAAGGCGATCTAGGATGAAGAAACAGAAGCACTTGGATCAATTGGCTGCACAACTGGCTCAACTCAACAACGACAATAATCACTTACTCACAACACTCAACCTCACTACACAACGCTATCTCACCATTCAGGCTCAAAATTCTGTGCTCACAGCTCAAGTAGCTGAACTAACTCACAGGCTCCAATCCTTCAATCAGATCATTGCTTTCTTCAATCCTAGCAATGTAGTTTTTGAAACTGCAGATTATGCATCAACCACTTTTGTTGACCCTGCACCCAATAACTTCTTCAACCCATTGAATATGAATCATCAACCTATCATGCCTTCTGCAGAAGCCATGTTGCAATACTGA 2355 0.4106 MSVITMSQLTDLQPKLGHESEHSEDEKKKRVGSFKKVAISASSKFKHSFAKKTRRHSRVMSVSIEDEIDTEELMAVDAFRQVLILEELLPSKHDDHHMMLRFLKARKFDIEKTKQMWSDMLKWRNEFGADTIMEDFEFNEIDEVLKYYPQGHHGVDKDGRPVYIEKLGQVDSNKLLQVTTMERYLKYHVREFERTFNVKLPACSIAAKKHIDQSTTILDVQGVGLKSMNKTARDLLQRLQKIDGDNYPESLNRMFIINAGSGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCADKGGCMLSNKGPWDDPEILKMVQNGKGKAKRKSLSELNEKTITEDEAAHQKGCKESVPEAHDVQCLSLNVEQPTSFTVPGAKQCGVYQYDAFVDKSVDSSWNKSVQNDKYALSQGYVPSNTCDGFSKQLVGGIMSIVMGVVSMIRMTRNMPRKITEAAVYGSSVIYNENMLKAPHSITNNDHMRMMKRMGELEEKVAVLSMRPAMPPEKEEMLNNALCKVSALEQHLAATKKALEDALVRQVELQEQIEKKKKKKNKLVCHTHTCLAFLSGATGKVLLLCDSILFTSVVCLGPATLTNSPSFLVNYSTLSLNMASRSGTSSGSSMLLQNSGSEEDLQVLMDQRKRKRMISNRESARRSRMKKQKHLDQLAAQLAQLNNDNNHLLTTLNLTTQRYLTIQAQNSVLTAQVAELTHRLQSFNQIIAFFNPSNVVFETADYASTTFVDPAPNNFFNPLNMNHQPIMPSAEAMLQY 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0019 784 SUPERFAMILY Leucine zipper domain 656 708 IPR046347 GO:0003700|GO:0006355
Lal17g0019 784 Coils Coil 672 699 - -
Lal17g0019 784 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 140 314 IPR001251 -
Lal17g0019 784 Gene3D - 128 339 IPR036865 -
Lal17g0019 784 SMART brlzneu 652 716 IPR004827 GO:0003700|GO:0006355
Lal17g0019 784 Coils Coil 540 567 - -
Lal17g0019 784 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 654 717 IPR004827 GO:0003700|GO:0006355
Lal17g0019 784 CDD bZIP_plant_GBF1 657 729 IPR045314 GO:0003700|GO:0006355
Lal17g0019 784 Pfam bZIP transcription factor 656 706 IPR004827 GO:0003700|GO:0006355
Lal17g0019 784 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 11 571 - -
Lal17g0019 784 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 659 674 IPR004827 GO:0003700|GO:0006355
Lal17g0019 784 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 11 571 - -
Lal17g0019 784 SMART sec14_4 140 311 IPR001251 -
Lal17g0019 784 CDD SEC14 141 309 IPR001251 -
Lal17g0019 784 Pfam CRAL/TRIO, N-terminal domain 92 119 IPR011074 -
Lal17g0019 784 SUPERFAMILY CRAL/TRIO N-terminal domain 66 136 IPR036273 -
Lal17g0019 784 MobiDBLite consensus disorder prediction 1 32 - -
Lal17g0019 784 SMART CRAL_TRIO_N_2 95 120 IPR011074 -
Lal17g0019 784 PRINTS Cellular retinaldehyde-binding protein signature 98 120 - -
Lal17g0019 784 PRINTS Cellular retinaldehyde-binding protein signature 267 286 - -
Lal17g0019 784 PRINTS Cellular retinaldehyde-binding protein signature 300 309 - -
Lal17g0019 784 Pfam CRAL/TRIO domain 146 308 IPR001251 -
Lal17g0019 784 SUPERFAMILY CRAL/TRIO domain 140 337 IPR036865 -
Lal17g0019 784 MobiDBLite consensus disorder prediction 15 32 - -
Lal17g0019 784 Gene3D - 34 127 - -
Lal17g0019 784 Gene3D - 654 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0019 Lal-Chr17 92895 99316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0019 652 782 bZIP Transcription Factor Family AT4G34590 51.471 1.37e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal17g0019 CRAL_TRIO 2e-34 CL0512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0019 - - gmx:100802579 827.78