Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1865 ATGGGTAAGGTGGTGGAGTCTTTAGATGTGTCTAAATCAAAGGGTAACAAGAAGAAGAAGAAGAAAAAGGAAGACAATGTTTTGGAAGATGAAGCAGTGACTGGAAGGTGTTGGCTTAGTTTCAGATTCTTTGGGAACTGCATTTCTTCAAGATCCAAAGTTGATAGCTCAGTTAGTGCCACCACTGCTATTTATGCTGAAAGTAAATCAACTAATGATACGAGTAGAGACCAACCAACAGTTCTTGCTGTCTCTTCTACAACCACCAGTAATACTGAAAGCAATGCATCCACTTCCAAACTTGAAGAGGAGCTTAAAGTTGCTTCAAGGCTTCGAAAATTCTCTTTCAATGATCTTAAGTTCGCAACAAGAAATTTCCGGCCAGAGAGTCTTCTAGGTGAAGGTGGGTTTGGTTGCGTGTTCAAAGGATGGATCGAAGAAAATGGAACTGCACCAGTGAAACCTGGAACAGGGCTTACTGTAGCTGTGAAAACCCTCAACCATGATGGGCTCCAGGGTCATAAAGAATGGCTGGCCGAAGTAAATTTTCTTGGCGATTTAGTTCATCCAAACCTTGTTAAACTTATAGGTTACTGCATTGAGGATGATCAAAGGTTGCTTGTGTACGAGTTCATGCCTCGGGGAAGCCTGGAAAACCACTTGTTTAGGAGATCCCTTCCTCTTCCGTGGTCCATTAGGATGAAAATTGCACTAGGTGCTGCAAAGGGTCTTGCTTTTCTTCACGAGGAAGCTGAACGACCAGTAATATATAGGGATTTCAAAACTTCAAATATACTATTGGATGCAGACTACAATGCCAAGCTCTCGGACTTTGGACTTGCAAAAGATGGTCCAGAGGGTGATAAAACCCATGTGTCTACTCGAGTGATGGGAACCTATGGTTATGCAGCACCAGAATATGTCATGACGGGACATCTTACATCAAGGAGTGATGTGTATAGTTTCGGAGTTGTACTACTTGAGATGTTGACCGGCAGAAGATCAATGGACAAAAACCGGCCCAATGGTGAACATAACCTTGTGGAATGGGCTAGGCCACAACTAGGAGAGAGAAGAAGGTTCTATCGGTTGATCGACCCTCGCTTGGAAGGTCACTTTTCGATCAAAGGAGCTCAGAAAGCTGGTCATCTAGCTGCTCACTGCCTTAGTAGAGATCCGAAAGCCAGACCGTTAATGAGTGAAGTTGTAGAAGCTTTGAAGCCTCTACCAAACCTTAAGGACATGGCTAGCTCATCATGTTATTTCCAGACAATGCAAGCGGGACACTTGAGTACAAGCCCAAATAGTAGAAATGGGGGAACACAAGGCGGCACGTTGGTCAGCCGGAATGGGCAACAGCAGAGGAGCCTTTCAGTATCACATGGTACTCGGGCATCTCCTTATCACCATCAGTATCCTCAACAATCACCAAAACCCAATGCCAAGGCATAG 1452 0.4442 MGKVVESLDVSKSKGNKKKKKKKEDNVLEDEAVTGRCWLSFRFFGNCISSRSKVDSSVSATTAIYAESKSTNDTSRDQPTVLAVSSTTTSNTESNASTSKLEEELKVASRLRKFSFNDLKFATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPRLEGHFSIKGAQKAGHLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSCYFQTMQAGHLSTSPNSRNGGTQGGTLVSRNGQQQRSLSVSHGTRASPYHHQYPQQSPKPNAKA 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1865 483 ProSiteProfiles Protein kinase domain profile. 126 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1865 483 SUPERFAMILY Protein kinase-like (PK-like) 112 426 IPR011009 -
Lal16g1865 483 MobiDBLite consensus disorder prediction 429 483 - -
Lal16g1865 483 PANTHER OS01G0588500 PROTEIN-RELATED 58 473 - -
Lal16g1865 483 Gene3D Transferase(Phosphotransferase) domain 1 212 425 - -
Lal16g1865 483 Pfam Protein tyrosine and serine/threonine kinase 130 406 IPR001245 GO:0004672|GO:0006468
Lal16g1865 483 MobiDBLite consensus disorder prediction 69 98 - -
Lal16g1865 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Lal16g1865 483 MobiDBLite consensus disorder prediction 1 26 - -
Lal16g1865 483 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 58 473 - -
Lal16g1865 483 ProSitePatterns Protein kinases ATP-binding region signature. 132 164 IPR017441 GO:0005524
Lal16g1865 483 CDD STKc_IRAK 132 409 - -
Lal16g1865 483 Gene3D Phosphorylase Kinase; domain 1 85 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1865 Lal-Chr16 17847881 17855735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1865 112 406 Glycoside Hydrolase AT3G07070 58.725 3.50e-117 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal16g1865 PK_Tyr_Ser-Thr 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1865 - - gmx:100787127 829.706