Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1840 ATGTATAATACAAATCCAACCCACAAAGAAAGCTTAGTTGCCATGGAAATTGGTTGGGAAATGGAGAAAAGCATAAGAGAGTTGAGGGAATATTTCAAAACAGGAAAGACTAGAAGTGTGACATGGAGGAAAAAGCAGCTCAAAGGAATCCTCGACCTTGTTCATGACAATGAAAGTGCCATGTTTGAAGCTCTCTACCAAGATCTTGGCAAGCACCCTGTTGAAGCTTACCGTGACGAGATCGGAGGGGTGGAAAAATCAGCCAATAACACTTTGAGCTATGTTGAGAAATGGATGGTTCCTAAAAAGGCAAGTTCTTCAATTTATTTTCTTTCTTTTTCTTTGAGTAGTATACCTTTGGTTTTCTTCCCAGCGAAAGGAGAAGTGTTGTCTGAACCACTTGGTGTGGTTCTCATATTTTCTTCTTGGAACTTCCCTATCATGCTAGCATTGGATCCATTAATTGGGGCAATATCTGCTGGAAATGTTGTAGTGATAAAACCTTCAGACCAAGCTCCCAAATGCTCTAATTTTCTTGCCAATATAATTCCTCACTATTTGGACTCTAATGCTGTCAAGGTTATTGAGGGTGGAACTAATGTCTGTCAACAATTACTCCTACACAAATGGGACAAAATATTCTTTACTGGAAGTCCACGTGTGGCAAGCATAGTGATGACTGCTGCTGCAAAGAATTTAACTCCTGTTACTCTAGAGCTTGGTGGGAAATGCCCTGCTATACTTGACCACTTTTCCAATCCTTCAGATTTTAAGTTGGCAGTAAAAAGAATTGTAGGAGGAAAATGGGGACCTTGCAGTGGACAAGCATGTATAGGAATAGACTATGTGCTTGTTGAGGACAAGTTTTCATCTGCTCTGATAGAACTATTAAAGAAGATAATAAGCAAATTTTATGGTGAGAATCCAATAGAATCAAAAGTCATTTCTAGAATAGTAAACAAGCAGAACTTTGAGAGACTTTGCAATCTTCTTAAAGATCCTCTTGTTGCTGCTTGCATAGTTCATGGTGGTTCAGTTGATGAAGAAAACCTGTTCATTGAGCCCACAATCTTGTTAGATCCTCCACTTAATGCTCAGATAATGATGGAAGAAATCTTTGGGCCATTGCTTCCAGTAATCACATTGAATAAAATTCAAGAAAGCATTGAGTTTATCAATTCAAGGCCTAAACCTCTTGCTATTTATGCCTTCACCAAAGATCAAACTTTCAAGACAAAGATTCTATCACAAACATCCTCAGGAAGTGTCATATTTAATGATACATTGGTTCAATTTCTATGTGATACCCTACCATTTGGAGGTGTTGGGCAAAGTGGTTTTGGAAGGTACCATGGGAAGTACTCTTTTGACACTTTCAGCCATGAAAAAGCTATAATGCATAGAAACTTATGCCTTGAAATTGAGCCAAGATACCCTCCATGGAATAACTTCAAGCTAGAGTTTATCAGAAAGGCCTATAGATTTAACTACTTTGGACTATTTCTACAAATGCTGGGATTCAACAAATACAATTAA 1536 0.3809 MYNTNPTHKESLVAMEIGWEMEKSIRELREYFKTGKTRSVTWRKKQLKGILDLVHDNESAMFEALYQDLGKHPVEAYRDEIGGVEKSANNTLSYVEKWMVPKKASSSIYFLSFSLSSIPLVFFPAKGEVLSEPLGVVLIFSSWNFPIMLALDPLIGAISAGNVVVIKPSDQAPKCSNFLANIIPHYLDSNAVKVIEGGTNVCQQLLLHKWDKIFFTGSPRVASIVMTAAAKNLTPVTLELGGKCPAILDHFSNPSDFKLAVKRIVGGKWGPCSGQACIGIDYVLVEDKFSSALIELLKKIISKFYGENPIESKVISRIVNKQNFERLCNLLKDPLVAACIVHGGSVDEENLFIEPTILLDPPLNAQIMMEEIFGPLLPVITLNKIQESIEFINSRPKPLAIYAFTKDQTFKTKILSQTSSGSVIFNDTLVQFLCDTLPFGGVGQSGFGRYHGKYSFDTFSHEKAIMHRNLCLEIEPRYPPWNNFKLEFIRKAYRFNYFGLFLQMLGFNKYN 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1840 511 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 29 463 IPR016162 GO:0016491
Lal16g1840 511 PANTHER ALDEHYDE DEHYDROGENASE 23 508 IPR012394 GO:0006081
Lal16g1840 511 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 242 445 IPR016163 GO:0016620
Lal16g1840 511 PIRSF ALDH 3 507 IPR012394 GO:0006081
Lal16g1840 511 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER F1 23 508 - -
Lal16g1840 511 Pfam Aldehyde dehydrogenase family 20 464 IPR015590 GO:0016491
Lal16g1840 511 SUPERFAMILY ALDH-like 20 482 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1840 Lal-Chr16 17472421 17477660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1840 21 509 Aldehyde Dehydrogenase Gene Family AT4G36250 59.918 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1840 K00128 - gmx:100808513 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1840 16 17472421 17477660 Lal16g1840 16 17472421 17477660 ECH