Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1834 TTCCAAACCGTTACAGCGAATATAGAATCCAATCGGGAGAAGAATAATAAAGCGTTGATCTCTGCGGCGGATAACGGTAATCGGAAGAAGATGTCATCGTCGAACAGACACGGTTACGGTGGTGGTAGTGGTGAGGAGGTTAGGGCTTCTCACATATTGATCAAACACGAAGGTTCTAGAAGGAAGGCTTCATGGAAGGATCCAGAAGGACGTGTTATCAAGAACACTACCAGAGATAACGCTGTTTCTCAACTCAAGGCACTCCAAGACGACATCGTTTCGGGAAAGGTTAAGTTTGAGGACGTTGCCGCTCGTTACTCCGATTGCAGCTCAGCTAAGCGTGGCGGCGATCTTGGTCCTTTTGGTCGTGGGCAGATGCAGAAGCCTTTTGAAGAAGCAACTTTTGCTCTTAAAGTTGGTGAAATTAGTGACATTGTGGATACTGACAGTGGTGTCCACATAATCAAAAGAACAAATTGA 480 0.4583 FQTVTANIESNREKNNKALISAADNGNRKKMSSSNRHGYGGGSGEEVRASHILIKHEGSRRKASWKDPEGRVIKNTTRDNAVSQLKALQDDIVSGKVKFEDVAARYSDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKRTN 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1834 159 Pfam PPIC-type PPIASE domain 51 158 IPR000297 GO:0003755
Lal16g1834 159 SUPERFAMILY FKBP-like 44 158 - -
Lal16g1834 159 MobiDBLite consensus disorder prediction 22 44 - -
Lal16g1834 159 ProSitePatterns PpiC-type peptidyl-prolyl cis-trans isomerase signature. 99 119 IPR023058 -
Lal16g1834 159 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 37 158 - -
Lal16g1834 159 MobiDBLite consensus disorder prediction 22 39 - -
Lal16g1834 159 Gene3D - 42 159 IPR046357 GO:0003755
Lal16g1834 159 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 44 159 IPR000297 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1834 Lal-Chr16 17450293 17451978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1834 77 156 Sulfurtransferasese or Rhodanese AT5G19370 36.585 1.92e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1834 K09578 - gmx:100500451 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1834 16 17450293 17451978 Lal16g1834 16 17450293 17451978 ECH
Lal15g1505 15 17178408 17181480 Lal16g1834 16 17450293 17451978 LSH