Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1828 ATGGGTTCCAATGAAATTATTGAAAGCTCCGGAGCTGAGGTTGTCACCGTTGATGTAAACATTACCAACGGTCTCATTCAGAACGGCCATGTTTATCTAGATGTCAGGACCATAGAAGAGTTTGAGAAAGGGCATGTGGATGCAGAGAAGATTATTAATATCCCATACATGTTCAACACACCAGAGGGTCGGGTGAAGAACCCAGAGTTTCTGAAGGAGGTTTTATCTGCTTGCAACAAACAAGATCATCTCATTGTGGGTTGCCAAAGTGGAGTGAGATCTCTATATGCAACTGCAGATCTTTTGGCTGAAGGATTTAAGGATGTGAGCAACATGGGTGGAGGTTATCTGGACTGGGTTAAAAACCAATTTCCTGTGAAAATACCTATAACAAATGAAAAGGAGCTATGA 411 0.4185 MGSNEIIESSGAEVVTVDVNITNGLIQNGHVYLDVRTIEEFEKGHVDAEKIINIPYMFNTPEGRVKNPEFLKEVLSACNKQDHLIVGCQSGVRSLYATADLLAEGFKDVSNMGGGYLDWVKNQFPVKIPITNEKEL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1828 136 ProSiteProfiles Rhodanese domain profile. 26 128 IPR001763 -
Lal16g1828 136 PANTHER THIOSULFATE SULFURTRANSFERASE 18 9 130 - -
Lal16g1828 136 SMART rhod_4 17 125 IPR001763 -
Lal16g1828 136 PANTHER THIOSULFATE SULFURTRANSFERASE 18 9 130 IPR044684 GO:0003824
Lal16g1828 136 Pfam Rhodanese-like domain 30 121 IPR001763 -
Lal16g1828 136 CDD RHOD 25 120 - -
Lal16g1828 136 Gene3D - 3 128 IPR036873 -
Lal16g1828 136 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 14 126 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1828 Lal-Chr16 17409670 17412720 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1828 3 126 Sulfurtransferasese or Rhodanese AT5G66170 58.400 1.82e-50 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1828 - K15692 pvu:PHAVU_003G264200g 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1828 16 17409670 17412720 Lal16g1828 16 17409670 17412720 ECH
Lal16g0136 16 814227 815202 Lal16g1828 16 17409670 17412720 PCT
Lal16g1828 16 17409670 17412720 Lal16g0136 16 814227 815202 PCT