Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1807 ATGAAATTTTCCTTTCTTCTCTTTTTCTTTTCTCTCTTTTTTCTCCTAATCTCGTTCTTTCTCAATTCCACCCATAATTCTGATCTAACCAATTCACATCTCTCTTCTCTGAATCAGTTTCATGTCAATGAACTTTCTCGATCCCTTGTCCCTATTGCATCGTATCCTCCACGAGATTTAATTTTGGAGCCAGGTCAAAAAGCTCTCCCTAGCAATAAGCCGACTACAGCACTGATTGCTACCCTAGATGGGACTATGTATATGGTGGACAGAGAAGAGAGTGGTTCCATGAAGGTGATATGGTCATTCCCAACAGGATCACCAATCTACAATTCGTACAAAGCTCCTATCAACAATGATAATGGTAAAGAAAATGCATCTGCAACACTAATTAACGGGTTCGTGGAATGTGGGAAAGACTGGGCATTGTACATGCATGACAAGCATTTTGGCAAAATGAGAATCTCAGAAACCATTGCAGAATATGTAGCTCGTACGCCTACCTTTTCAGAGGATGGAGCGGTTACACTTGGATCCAAACGAAGCACTTTGTTTGAAATTGATGCTAAAACTGGAAGGATCATTCAAATGCATGCTATGTCGGAACTTGATAACTCTTCTATACCTTTGAGTGATGACAAACAAATTGTTCCAAATACGATTCATAGGCAAAATAAGGAATTTTCTGATCCTGTGAAGCTAAAATCACCAGAGATGCTGCTCAAGATATTTAGGACAGATTATTCTCTTAAATCTGTTGGTCCTGGTTCAGGAATTGTTTTATGGACCATGACAGTAGCTGAATTTGAGGCTGTATTATTATGCCAACATGCCTCTTTTGATGCAGAGAATGAGTATGTTTCTGACATGGGCCTAAATTTTGCAATGCCATGTCAAGAGATGCAGCAAGTTTTTCGCCTGCAAAAGAATTTTCTGTTAGAACCTTCAATTACCGAAAGACTACCTAGGGATTATCATGAAAATGATATGCTCCCAATGCCTGCCTCAGATTTGATGCTTCCGTCACAACCTAGTATTGATAGATTTTTCAATGGTCATGATAGTAATGCGATGCTTCCTGTTCCTCTGCCAATTTCTCTGCCTTCTCGACAACCAAAATTCAGCAACTACGACAATAATAATAATAATGCAGATGTGCTCTCCCACCCTCCTGTGGAATTTACTACATCAGAGAAAGTTTATCTGAACAATATGAACAAATGGTCATTACCATTACTTTCTGTATTTTTTGCGGTTGTTTCTCTAGTCATCTACTATGCTCCAGTGGTTAAAAATCAAGATATATTGAAGGGCCAAAACAATGAGTTTGAATTAAAAAACTCTCCTTCTAAGAGAAAGAAAACCCGTAAGTCCGGAAAGAACAACGGTACAGTTGGCAAAAAAGAAAAGCATATGTCATCAGAAAGTGAGGATGCACTAACACAAAAGAATAATGATAAGGAAGCATGGCTCTTTAATCAAGCGGATGGGCGCATGGTTGGTAAACTATTTGTGTCAAATAAAGAAATTGCTAAGGGAAGCAATGGGACTATTGTCTTCGAAGGGATGTACGAAGAAGGTCGAGCAGTTGCTGTCAAGCGTCTTGTCAGGGCTCATCACGATGTAGCCAGTAAAGAAATACAAAATCTCATTCTATCTGACCGTCATCCAAACATTGTTCGATGGCATGGAGTGGAATATGATCAAGATTTTGTATACCTTGCTCTGGAGCGTTGTTCATACAGCTTGGATAATTTGATTTTCAAATGTTCGTTAAAGACCGAGATGGACACAGATAAGGATAATATGCAAGATCTTTGGAAACCAAATGGTTATCCATCACCTCTATTACTGAAATTGATGAGGGATGTAATTTCTGGGATTGTTCATTTGCATGAACTAGGAATAATACATCGAGATTTGAAACCCCAAAATGTATTGATAATTGAGGGAAGATCTTTATGTGCAAAGCTTTCTGATATGGGCATTAGCAAACGCCTTCTTGAAAATATGTCTTCTTTAGCAAATAATGTTACTGGTGGTGGCAGTTCCGGTTGGCAAGCACCGGAACAGCTTGTTCAAGGACGTCAAACACGGGCTGTAGATTTATTTAGTTTAGGTTGTGTGCTCTTTTTCTGCTTGACCGGTGGAAGACATCCATTTGGAGAACAGCTTGAACGTGATGTCAATGTCGTGAGGAATAACAAGGATCTATTCTTAGTCGAGTTCATTCCTGAAGCTGAGGATCTTATTTCCTGTTTGTTAAACCCTGACCCTGATCTAAGGCCAAAGGCAATTGAAGTGTTGCACCATCCTTTTTTCTGGAGTGCTGAGATGAGACTTTCATTTTTACGTGACACCAGTGACAGAGTGGAATTGGAAGATAGGGAGACTGATTCTGATGTTTTGAATGCATTAGAAAGCATTGCTACAGTGGCCTTAGGTGTAAGATGGAATGAGAAGGTGGAATCTGCTTTCCTTAGTAACATTGGTCGTTACCGGCGATATAAGTTTGACAGTGTTCGAGACTTGTTGCGGGTTATGAGAAACAAGCTTAATCATTATAGAGAAATGCCTCAAGAAATTCAGGAACTTGTAGGACCTATTCCTGAAGGATTTAATGACTACTTTGCAAGTAGATTCCCAAAACTCTTGATTGAAGTGTATAAAGTTATATGCAAATATTGCAAGGAAGAAGAATGCTTTCAGAGGTATTTTAGAAATGTTGATTAG 2733 0.3904 MKFSFLLFFFSLFFLLISFFLNSTHNSDLTNSHLSSLNQFHVNELSRSLVPIASYPPRDLILEPGQKALPSNKPTTALIATLDGTMYMVDREESGSMKVIWSFPTGSPIYNSYKAPINNDNGKENASATLINGFVECGKDWALYMHDKHFGKMRISETIAEYVARTPTFSEDGAVTLGSKRSTLFEIDAKTGRIIQMHAMSELDNSSIPLSDDKQIVPNTIHRQNKEFSDPVKLKSPEMLLKIFRTDYSLKSVGPGSGIVLWTMTVAEFEAVLLCQHASFDAENEYVSDMGLNFAMPCQEMQQVFRLQKNFLLEPSITERLPRDYHENDMLPMPASDLMLPSQPSIDRFFNGHDSNAMLPVPLPISLPSRQPKFSNYDNNNNNADVLSHPPVEFTTSEKVYLNNMNKWSLPLLSVFFAVVSLVIYYAPVVKNQDILKGQNNEFELKNSPSKRKKTRKSGKNNGTVGKKEKHMSSESEDALTQKNNDKEAWLFNQADGRMVGKLFVSNKEIAKGSNGTIVFEGMYEEGRAVAVKRLVRAHHDVASKEIQNLILSDRHPNIVRWHGVEYDQDFVYLALERCSYSLDNLIFKCSLKTEMDTDKDNMQDLWKPNGYPSPLLLKLMRDVISGIVHLHELGIIHRDLKPQNVLIIEGRSLCAKLSDMGISKRLLENMSSLANNVTGGGSSGWQAPEQLVQGRQTRAVDLFSLGCVLFFCLTGGRHPFGEQLERDVNVVRNNKDLFLVEFIPEAEDLISCLLNPDPDLRPKAIEVLHHPFFWSAEMRLSFLRDTSDRVELEDRETDSDVLNALESIATVALGVRWNEKVESAFLSNIGRYRRYKFDSVRDLLRVMRNKLNHYREMPQEIQELVGPIPEGFNDYFASRFPKLLIEVYKVICKYCKEEECFQRYFRNVD 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1807 910 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 68 906 - -
Lal16g1807 910 SUPERFAMILY Protein kinase-like (PK-like) 490 789 IPR011009 -
Lal16g1807 910 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Lal16g1807 910 PANTHER IRE1-RELATED 68 906 IPR045133 GO:0004521|GO:0004674|GO:0030968
Lal16g1807 910 Gene3D Phosphorylase Kinase; domain 1 493 577 - -
Lal16g1807 910 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 48 212 IPR011047 -
Lal16g1807 910 MobiDBLite consensus disorder prediction 445 482 - -
Lal16g1807 910 ProSiteProfiles Protein kinase domain profile. 504 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1807 910 Gene3D - 68 280 IPR015943 GO:0005515
Lal16g1807 910 Gene3D Transferase(Phosphotransferase) domain 1 593 776 - -
Lal16g1807 910 SMART PGNneu 839 893 - -
Lal16g1807 910 Gene3D KEN domain 777 910 IPR038357 -
Lal16g1807 910 ProSiteProfiles KEN domain profile. 777 908 IPR010513 GO:0004540|GO:0006397
Lal16g1807 910 Pfam Ribonuclease 2-5A 780 906 IPR010513 GO:0004540|GO:0006397
Lal16g1807 910 MobiDBLite consensus disorder prediction 462 482 - -
Lal16g1807 910 CDD RNase_Ire1 778 906 - -
Lal16g1807 910 SMART serkin_6 504 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1807 910 Pfam Protein kinase domain 506 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1807 Lal-Chr16 17193026 17200780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1807 510 773 MAP Kinase Kinase Kinase AT3G06030 25.180 8.90e-22 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Lal16g1807 Pkinase 2.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1807 K08852 - gmx:100788389 1214.91