Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1775 ATGAAATTTCCCAAATTCTCTACCAAGAACAGTAACAATCTTCATCTCTCTTCTTCCCTTCAAGATCTTTCTTCCTATCACTTAGATCCTCAACAACCCATTAATCTCGATGGGACCCACTTTCCCCAAAACCAAAAAGCTTCAATTTTTCCCAAATCAAAACCACCTCTTCCTCTTCGCAAGAAATGGGTCAGGTCGATCGCGTTAGTTTTATCACTAATTTTGTTCATTTTATCGTTTTACATGATTGTTACTGTTATTTATTCCAATTGGATTTATAATCAAGGGTTAGGAAGATATTATGTTGTTCTTGATTGTGGTAGTACTGGGACAAGGGTTTATGTTTATCAAGCTCAGATTCATAACAAAGATGATAGTATTAGTAGTAGTAGTAGTCTTCCTATAGCTATAAAATCGTTAAGGGATGGTTCGAAAATGAAAAATCGGGGTGGGCGTGCCTATAATCGAATGGAGACTGAGCCAGGGCTTGATAAGCTAGTACACAATGTATCTGGTTTGAAGGCTGCACTTAAGCCACTTCTTAAGTGGGCCCAGAAGCAGATACCGGAGGATGCTCATCGGGGTACTTTAGTTTTTCTTTATGCTACTGCTGGAGTGAGGAGGCTTCCGAGTCAGGACTCTAGATGGCTGCTGGATAGTGCTTGGAATGTGATTAAGGGTTCTTCGCCTTTTGTTTGTAGGAAGGATTCGGTTAAGATTATCACTGGTACCGAAGAGGCTTACTTTGGATGGATTGCGCTTAACTATCATAGTCACATTTTGGGGGCTAAACCAAGGAAAGAAACTTATGGCGCACTCGATTTAGGTGGCTCGTCATTGCAGGTTACGTTTGAGGGTGATCGGGAGGTGAATGGTGAGACTAGTTTGTATGTTAGGATTGGATCGGTGAACCATCATCTCACTGCGTATTCTCTTGCGGGATATGGTCTCAATGAGGCTTTTGATAAATCTGTGGCACGTCTTTTTAAGAAAGAGTTTGGGTCCACCAGTGCAGTTGTAGCTAATGAAATCAAGGAACTTAAACATCCTTGCTTGCAATCTGGGTACAAGGATCAATTCACCTGCTCTCGTTGTTCTTCCAACAACCAAGAAGGTGAAAGCCCTAGAGTTAAGGGGGAAATGTTGGATAAAAAGGGAGAATCAAGAACCCCGGTAATGCTTATCGGTGCTCCAAATTGGCAAGAATGCAGTGCACTTGCAAAGGTTGCTGTCAATTTGTCTGAATGGTCTGATGTCAAACCAGGACTTGATTGTGAAGTGCATCCTTGTGCTCTACGCGATAACCTCCCTCGCCCATTGGGTCACTTTTATGTGATTTCAGGGTTTTTTGTCGTGTACCGTTTTTTCAACCTGACTTCTGAAGCCACACTTGATGATATATTGGAAAAGGGTAAGGATTTCTGTGAAAAAAGATGGGATGTTGCAAAAAAGAGCGTTGCTCCTCAGCCCTTTATTGAGCAGTACTGCTTTAGGGCACCGTATATTTCATCACTTTTGAGAGAGGGTTTGCACATTACTGATAAGCATATAACTGTTGGCTCTGGAAGTATCACTTGGACACTCGGGGTTGCCTTGTTAGAAGCCGGGAAGGCATATTCCCCTAGATTTGGTCTACATGGTTTTGACCTGCTCCAGACAAAGATTAATCCTTTTATTCTTATCCCAATTCTGTTAATATCCTTCATTCTCCTACTTTGTGCTTTATCATGCGTTGGCAATTGCATGCCAAGATTTTTCTGGAGGCAATATCTTCCCCTATTCAGGCATAACAGTGCGTCGAGTGCGTCAGTTATTAATATCCCGTCTCCTTTTCGGTTCCGGCGTTGGAGTCCGATAATTTCTGGGGAGGGGAGAATGAAGACGCCACTCAGCCCTACAATTGCAAGTTCACAAGATAGACCATTTAGCATGGAGCATGGTCTTAGTGGTAACAGTGGTGGTGGCGGCGGCATCCAGCTTATGGAATCTTCCTTTTACCCATCGGCTAGTAGTGTTTCGCATAGCTATTCCTCGAGCAATTTATCTCAGATGCAGTTTGATAGTAATAATATAGGTACTTTCTGGACGCCCCACAGAAGTCAGATGCGCCTGCAGAGTAGGAGATCACAATCTCGAGACGACCTGATTTCCTCCGTGGCAGATGCACACATTGTGAATCTTTAG 2184 0.4295 MKFPKFSTKNSNNLHLSSSLQDLSSYHLDPQQPINLDGTHFPQNQKASIFPKSKPPLPLRKKWVRSIALVLSLILFILSFYMIVTVIYSNWIYNQGLGRYYVVLDCGSTGTRVYVYQAQIHNKDDSISSSSSLPIAIKSLRDGSKMKNRGGRAYNRMETEPGLDKLVHNVSGLKAALKPLLKWAQKQIPEDAHRGTLVFLYATAGVRRLPSQDSRWLLDSAWNVIKGSSPFVCRKDSVKIITGTEEAYFGWIALNYHSHILGAKPRKETYGALDLGGSSLQVTFEGDREVNGETSLYVRIGSVNHHLTAYSLAGYGLNEAFDKSVARLFKKEFGSTSAVVANEIKELKHPCLQSGYKDQFTCSRCSSNNQEGESPRVKGEMLDKKGESRTPVMLIGAPNWQECSALAKVAVNLSEWSDVKPGLDCEVHPCALRDNLPRPLGHFYVISGFFVVYRFFNLTSEATLDDILEKGKDFCEKRWDVAKKSVAPQPFIEQYCFRAPYISSLLREGLHITDKHITVGSGSITWTLGVALLEAGKAYSPRFGLHGFDLLQTKINPFILIPILLISFILLLCALSCVGNCMPRFFWRQYLPLFRHNSASSASVINIPSPFRFRRWSPIISGEGRMKTPLSPTIASSQDRPFSMEHGLSGNSGGGGGIQLMESSFYPSASSVSHSYSSSNLSQMQFDSNNIGTFWTPHRSQMRLQSRRSQSRDDLISSVADAHIVNL 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1775 727 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 38 699 IPR000407 GO:0016787
Lal16g1775 727 Pfam GDA1/CD39 (nucleoside phosphatase) family 99 533 IPR000407 GO:0016787
Lal16g1775 727 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 38 699 - -
Lal16g1775 727 Gene3D - 93 243 - -
Lal16g1775 727 Gene3D Exopolyphosphatase. Domain 2 244 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1775 Lal-Chr16 16802571 16806851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1775 12 727 Nodulin-like Gene Family AT4G19180 58.702 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1775 - - lja:Lj0g3v0174799.1 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0379 16 2281396 2288038 Lal16g1775 16 16802571 16806851 PCT
Lal23g1178 23 13163316 13168642 Lal16g1775 16 16802571 16806851 PCT
Lal16g1775 16 16802571 16806851 Lal16g0379 16 2281396 2288038 PCT
Lal16g1775 16 16802571 16806851 Lal23g1178 23 13163316 13168642 PCT